Evidence map›Paper›PMID 38238675›Full record

ArticleBMC plant biology2024

Identification and function analysis of GABA branch three gene families in the cotton related to abiotic stresses.

Juyun Zheng, Zeliang Zhang, Nala Zhang, Yajun Liang, Zhaolong Gong, Junhao Wang, Allah Ditta, Zhiwei Sang, Junduo Wang, Xueyuan Li

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
10.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

  1. Genome-Wide Identification of the WheatPlants (Basel, Switzerland) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Juyun Zheng *Cash Crops Research Institute of Xinjiang Academy of Agricultural Science ( XAAS ), 830001, Urumqi, Xinjiang, P.R. China.
Zeliang Zhang *Xinjiang Production and Construction Corps, Fifth Division, Eighty-third Regiment, Economic Development Office, 833400, Jinhe, Xinjiang, P.R. China.
Nala Zhang *Engineering Research Centre of Cotton, Ministry of Education/College of Agriculture, Xinjiang Agricultural University, 311 Nongda East Road, 830052, Urumqi, Xinjiang, P.R. China.
Yajun LiangCash Crops Research Institute of Xinjiang Academy of Agricultural Science ( XAAS ), 830001, Urumqi, Xinjiang, P.R. China.
Zhaolong GongCash Crops Research Institute of Xinjiang Academy of Agricultural Science ( XAAS ), 830001, Urumqi, Xinjiang, P.R. China.
Junhao WangEngineering Research Centre of Cotton, Ministry of Education/College of Agriculture, Xinjiang Agricultural University, 311 Nongda East Road, 830052, Urumqi, Xinjiang, P.R. China.
Allah DittaCotton Group, Plant Breeding and Genetics Division, Nuclear Institute for Agriculture and Biology (NIAB) Faisalabad, NIAB-C Pakistan Institute of Engineering and Applied Sciences (PIEAS), Faisalabad, Pakistan.
Zhiwei SangEngineering Research Centre of Cotton, Ministry of Education/College of Agriculture, Xinjiang Agricultural University, 311 Nongda East Road, 830052, Urumqi, Xinjiang, P.R. China.
Junduo WangCash Crops Research Institute of Xinjiang Academy of Agricultural Science ( XAAS ), 830001, Urumqi, Xinjiang, P.R. China. 13579975299@163.com.
Xueyuan LiCash Crops Research Institute of Xinjiang Academy of Agricultural Science ( XAAS ), 830001, Urumqi, Xinjiang, P.R. China. xjmh2338@163.com.
Xinjiang Academy of Agricultural Sciences · CNXinjiang Agricultural University · CNNuclear Institute for Agriculture and Biology · PKXinjiang Production and Construction Corps · CN

Funding

Doctoral Program of Cash Crops Research Institute of Xinjiang Academy of Agricultural Science JZRC2019B02National key R&D Program of China 2022YFD1200304-4Natural Science Foundation for Distinguished Young Scholars of Xinjiang Province, China 2022D01E20the National Natural Science Foundation of China no. U1903204, 31760405Xinjiang Key Laboratory of Crop Biotechnology xjnkywdzc-2022001-2
6 · The paper itself

Abstract

γ -aminobutyric acid (GABA) is closely related to the growth, development and stress resistance of plants. Combined with the previous study of GABA to promote the cotton against abiotic stresses, the characteristics and expression patterns of GABA branch gene family laid the foundation for further explaining its role in cotton stress mechanism. Members of GAD, GAB-T and SSADH (three gene families of GABA branch) were identified from the Gossypium hirsutum, Gossypium barbadense, Gossypium arboreum and Gossypium raimondii genome. The GABA branch genes were 10 GAD genes, 4 GABA-T genes and 2 SSADH genes. The promoter sequences of genes mainly contains response-related elements such as light, hormone and environment.Phylogenetic analysis shows that GAD indicating that even in the same species, the homologous sequences in the family. The GABA-T gene of each cotton genus was in sum the family had gene loss in the process of dicotyledon evolution. SSADH families Gossypium hirsutum, Gossypium barbadense, Gossypium arboreum and Gossypium raimondii were closely related to the dicot plants.GABA gene is involved in the regulation of salt stress and high temperature in Gossypium hirsutum.GABA attenuated part of the abiotic stress damage by increasing leaf protective enzyme activity and reducing reactive oxygen species production.This lays the foundation for a thorough analysis of the mechanism of GABA in cotton stress resistance.

Indexed as

GossypiumMultigene FamilyGene Expression Regulation, PlantGenes, PlantGenome, PlantPhylogenyPlant ProteinsStress, PhysiologicalPlant ProteinsExpression analysisGABA branchGene familyStress

Identifiers

PMID38238675
PMCPMC10797812
OpenAlexW4391006052

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.