Evidence map›Paper›PMID 38236415›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2024

Identification of Increased Grain Length 1 (IGL1), a novel gene encoded by a major QTL for modulating grain length in rice.

Jiayu Niu, Fei Wang, Chengcheng Yang, Qiwen Ye, Jingxian Huang, Yumei La, Qianqian Wang, Jie Dai, Tiange Hu, Liran Sang and 8 more

Abstract read
PubMed Publisher
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. A novel QTLFrontiers in plant science · 2026
    Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 4 institutions in 2 countries.

Jiayu NiuCollege of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China.
Fei WangCollege of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China.
Chengcheng YangCollege of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China.
Qiwen YeCollege of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China.
Jingxian HuangCollege of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China.
Yumei LaCollege of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China.
Qianqian WangCollege of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China.
Jie DaiAcademy for Advanced Interdisciplinary Studies, College of Engineering, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China.
Tiange HuCollege of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China.
Liran SangCollege of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China.
Peijiang ZhangAnhui Province Key Laboratory of Rice Genetics and Breeding, Rice Research Institute, Anhui Academy of Agricultural Sciences, Hefei, 230041, Anhui, China.
Yu ZouAnhui Province Key Laboratory of Rice Genetics and Breeding, Rice Research Institute, Anhui Academy of Agricultural Sciences, Hefei, 230041, Anhui, China.
Zhaoyu ZhaiCollege of Artificial Intelligence, Nanjing Agricultural University, Nanjing, 210095, China.
Jian JinState Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Life Science and Technology, Guangxi University, Nanning, 530004, Guangxi, China.
Dina AbdulmajidRice Research and Training Centre, Field Crops Research Institute, Agricultural Research Centre, Kafr El-Sheikh, 33717, Kafr El-Sheikh Governorate, Egypt.
Jingjing GuoCentre in Artificial Intelligence Driven Drug Discovery, Faculty of Applied Sciences, Macao Polytechnic University, Macao, 999078, China.
Huhui ChenCollege of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China. chenhuh@njau.edu.cn.
Honggui LaCollege of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China. hongguila@njau.edu.cn.ORCID http://orcid.org/0000-0002-4472-0240
Nanjing Agricultural University · CNRice Research Institute · CNGuangxi University · CNMacao Polytechnic University · MO

Funding

Jiangsu Agricultural Science and Technology Independent Innovation Fund CX(22)3156Natural Science Foundation of Jiangsu Province BK20211211Open Research Fund Program of Anhui Province Key Laboratory of Rice Genetics and Breeding SDKF-2023-04
6 · The paper itself

Abstract

key messageA novel quantitative trait locus qIGL1, which performed a positive function in regulating grain length in rice, was cloned by the map-based cloning approach; further studies revealed that it corresponded to LOC_Os03g30530, and the IGL1 appeared to contribute to lengthening and widening of the cells on the surface of grain hulls. Grain length is a prominent determinant for grain weight and appearance quality of rice. In this study, we conducted quantitative trait locus mapping to determine a genomic interval responsible for a long-grain phenotype observed in a japonica cultivar HD385. This led to the identification of a novel QTL for grain length on chromosome 3, named qIGL1 (for Increased Grain Length 1); the HD385 (Handao 385)-derived allele showed enhancement effects on grain length, and such an allele as well as NIP (Nipponbare)-derived allele was designated qigl1

Indexed as

OryzaQuantitative Trait LociAllelesAmino AcidsChromosome MappingEdible GrainAmino Acids

Identifiers

PMID38236415
OpenAlexW4390987496

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.