Evidence map›Paper›PMID 38236168›Full record

ArticleAnalytical chemistry2024

MARS: A Multipurpose Software for Untargeted LC-MS-Based Metabolomics and Exposomics.

Laura Goracci, Paolo Tiberi, Stefano Di Bona, Stefano Bonciarelli, Giovanna Ilaria Passeri, Marta Piroddi, Simone Moretti, Claudia Volpi, Ismael Zamora, Gabriele Cruciani

Open access · hybridAbstract read
In one paragraph

Article in Analytical chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Laura GoracciDepartment of Chemistry, Biology and Biotechnology, Universita degli Studi di Perugia, via Elce di Sotto 8, Perugia 06123, Italy.ORCID 0000-0002-9282-9013
Paolo TiberiMolecular Discovery Ltd., Centennial Park, Borehamwood, Hertfordshire WD6 4PJ, U.K.ORCID 0009-0006-4485-9062
Stefano Di BonaMolecular Horizon, Via Montelino, 30, Bettona (PG) 06084, Italy.ORCID 0000-0002-4033-9629
Stefano BonciarelliMolecular Discovery Ltd., Centennial Park, Borehamwood, Hertfordshire WD6 4PJ, U.K.ORCID 0000-0003-0474-0922
Giovanna Ilaria PasseriMolecular Discovery Ltd., Centennial Park, Borehamwood, Hertfordshire WD6 4PJ, U.K.ORCID 0009-0003-7824-7329
Marta PiroddiMolecular Horizon, Via Montelino, 30, Bettona (PG) 06084, Italy.ORCID 0000-0002-0880-0630
Simone MorettiMolecular Horizon, Via Montelino, 30, Bettona (PG) 06084, Italy.ORCID 0000-0001-5599-5613
Claudia VolpiDepartment of Medicine and Surgery, P.le Gambuli 1, Perugia 06129, Italy.ORCID 0000-0002-3967-7954
Ismael ZamoraMass Analytica, Rambla de celler 113, Sant Cugat del Vallés 08173, Spain.ORCID 0000-0002-7700-0354
Gabriele CrucianiDepartment of Chemistry, Biology and Biotechnology, Universita degli Studi di Perugia, via Elce di Sotto 8, Perugia 06123, Italy.ORCID 0000-0002-4162-8692
Horizon Discovery Group (United States) · USMolecular Discovery (United Kingdom) · GBUniversity of Perugia · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Untargeted metabolomics is a growing field, in which recent advances in high-resolution mass spectrometry coupled with liquid chromatography (LC-MS) have facilitated untargeted approaches as a result of improvements in sensitivity, mass accuracy, and resolving power. However, a very large amount of data are generated. Consequently, using computational tools is now mandatory for the in-depth analysis of untargeted metabolomics data. This article describes MetAbolomics ReSearch (MARS), an all-in-one vendor-agnostic graphical user interface-based software applying LC-MS analysis to untargeted metabolomics. All of the analytical steps are described (from instrument data conversion and processing to statistical analysis, annotation/identification, quantification, and preliminary biological interpretation), and tools developed to improve annotation accuracy (e.g., multiple adducts and in-source fragmentation detection, trends across samples, and the MS/MS validator) are highlighted. In addition, MARS allows in-house building of reference databases, to bypass the limits of freely available MS/MS spectra collections. Focusing on the flexibility of the software and its user-friendliness, which are two important features in multipurpose software, MARS could provide new perspectives in untargeted metabolomics data analysis.

Indexed as

Liquid Chromatography-Mass SpectrometryTandem Mass SpectrometryChromatography, LiquidMetabolomicsSoftware

Identifiers

PMID38236168
PMCPMC10831794
OpenAlexW4390985526

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.