Evidence map›Paper›PMID 38234865›Full record

ArticleOpen research Europe2023

scikit-matter : A Suite of Generalisable Machine Learning Methods Born out of Chemistry and Materials Science.

Alexander Goscinski, Christian A Jorgensen, Victor Paul Principe, Guillaume Fraux, Sergei Kliavinek, Benjamin Aaron Helfrecht, Rhushil Vasavada, Philip Loche, Michele Ceriotti, Rose Kathleen Cersonsky

Abstract read
In one paragraph

Article in Open research Europe, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Mechanism of Charge Transport in Lithium Thiophosphate.Chemistry of materials : a publication of the American Chemical Society · 2024
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Alexander GoscinskiLaboratory of Computational Science and Modeling (COSMO), Institute of Materials, Ecole Polytechnique Federale de Lausanne, Lausanne, Vaud, 1015, Switzerland.ORCID https://orcid.org/0000-0001-8076-215X
Christian A JorgensenDepartment of Chemical and Biological Engineering, University of Wisconsin-Madison, Madison, Wisconsin, 53706, USA.ORCID https://orcid.org/0009-0003-2230-4451
Victor Paul PrincipeLaboratory of Computational Science and Modeling (COSMO), Institute of Materials, Ecole Polytechnique Federale de Lausanne, Lausanne, Vaud, 1015, Switzerland.
Guillaume FrauxLaboratory of Computational Science and Modeling (COSMO), Institute of Materials, Ecole Polytechnique Federale de Lausanne, Lausanne, Vaud, 1015, Switzerland.ORCID https://orcid.org/0000-0003-4824-6512
Sergei KliavinekLaboratory of Computational Science and Modeling (COSMO), Institute of Materials, Ecole Polytechnique Federale de Lausanne, Lausanne, Vaud, 1015, Switzerland.
Benjamin Aaron HelfrechtLaboratory of Computational Science and Modeling (COSMO), Institute of Materials, Ecole Polytechnique Federale de Lausanne, Lausanne, Vaud, 1015, Switzerland.ORCID https://orcid.org/0000-0002-2260-7183
Rhushil VasavadaDepartment of Computer Sciences, University of Wisconsin, Madison, USA.
Philip LocheLaboratory of Computational Science and Modeling (COSMO), Institute of Materials, Ecole Polytechnique Federale de Lausanne, Lausanne, Vaud, 1015, Switzerland.ORCID https://orcid.org/0000-0002-9112-0010
Michele CeriottiLaboratory of Computational Science and Modeling (COSMO), Institute of Materials, Ecole Polytechnique Federale de Lausanne, Lausanne, Vaud, 1015, Switzerland.ORCID https://orcid.org/0000-0003-2571-2832
Rose Kathleen CersonskyLaboratory of Computational Science and Modeling (COSMO), Institute of Materials, Ecole Polytechnique Federale de Lausanne, Lausanne, Vaud, 1015, Switzerland.ORCID https://orcid.org/0000-0003-4515-3441

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Easy-to-use libraries such as scikit-learn have accelerated the adoption and application of machine learning (ML) workflows and data-driven methods. While many of the algorithms implemented in these libraries originated in specific scientific fields, they have gained in popularity in part because of their generalisability across multiple domains. Over the past two decades, researchers in the chemical and materials science community have put forward general-purpose machine learning methods. The deployment of these methods into workflows of other domains, however, is often burdensome due to the entanglement with domain-specific functionalities. We present the python library scikit-matter that targets domain-agnostic implementations of methods developed in the computational chemical and materials science community, following the scikit-learn API and coding guidelines to promote usability and interoperability with existing workflows.

Indexed as

directional convex hullfeature reconstructionfeature selectionKPCovRPCovRPythonsample selection

Identifiers

PMID38234865
PMCPMC10792272

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.