Evidence map›Paper›PMID 38231483›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2024

Preclinical Evaluation of NTX-301, a Novel DNA Hypomethylating Agent in Ovarian Cancer.

Yinu Wang, Xiaolei Situ, Horacio Cardenas, Ellie Siu, Sayedabdulrazzaq A Alhunayan, Russell Keathley, Edward Tanner, Jian-Jun Wei, Yuying Tan, Chinmayee Vallabh Prabhu Dessai and 2 more

Open access · greenAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 7 citations in OpenAlex.

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  9. Chromatin Organization Governs Transcriptional Response and Plasticity of Cancer Stem Cells.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Yinu WangDepartment of Obstetrics and Gynecology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois.ORCID 0000-0003-3654-7350
Xiaolei SituDepartment of Obstetrics and Gynecology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois.ORCID 0009-0009-8500-357X
Horacio CardenasDepartment of Obstetrics and Gynecology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois.ORCID 0000-0002-2129-6766
Ellie SiuDepartment of Biological Sciences, Weinberg College of Arts and Sciences, Northwestern University, Chicago, Illinois.ORCID 0009-0009-7548-8542
Sayedabdulrazzaq A AlhunayanDepartment of Obstetrics and Gynecology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois.ORCID 0009-0005-5629-0881
Russell KeathleyDepartment of Obstetrics and Gynecology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois.ORCID 0000-0003-1532-5425
Edward TannerDepartment of Obstetrics and Gynecology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois.ORCID 0000-0003-0829-1642
Jian-Jun WeiDepartment of Pathology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois.ORCID 0000-0003-0281-2793
Yuying TanDepartment of Physics, Boston University, Boston, Massachusetts.ORCID 0000-0003-2536-4778
Chinmayee Vallabh Prabhu DessaiDepartment of Physics, Boston University, Boston, Massachusetts.ORCID 0000-0001-9568-7770
Ji-Xin ChengDepartment of Physics, Boston University, Boston, Massachusetts.ORCID 0000-0002-5607-6683
Daniela MateiDepartment of Obstetrics and Gynecology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois.ORCID 0000-0003-2169-5035
Northwestern University · USBoston University · US

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Daniela E Matei · 1993 to 2026
$153.9M
Targeting Lipid Unsaturation in Ovarian Cancer Stem CellsR01CA224275 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Ji-Xin Cheng, Daniela E Matei · 2018 to 2026
$3.6M
The Tissue Transglutaminase-Fibronectin Interaction in Ovarian Cancer MetastasisI01BX000792 · VA · RLR VA MEDICAL CENTER · PI MATEI, DANIELA E · 2011 to 2024
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Understanding Metabolic Reprogramming in Platinum Resistant Ovarian CancerI01BX006012 · VA · JESSE BROWN VA MEDICAL CENTER · PI Daniela E Matei, Colby Shad Thaxton · 2023 to 2026
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BLRD VA I01 BX000792BLRD VA I01 BX006012NCI NIH HHS P30 CA060553NCI NIH HHS R01 CA224275
6 · The paper itself

Abstract

purposeDNA methylation causes silencing of tumor-suppressor and differentiation-associated genes, being linked to chemoresistance. Previous studies demonstrated that hypomethylating agents (HMA) resensitize ovarian cancer to chemotherapy. NTX-301 is a highly potent and orally bioavailable HMA, in early clinical development. EXPERIMENTAL

designThe antitumor effects of NTX-301 were studied in ovarian cancer models by using cell viability, stemness and ferroptosis assays, RNA sequencing, lipidomic analyses, and stimulated Raman spectroscopy.

resultsOvarian cancer cells (SKOV3, IC50 = 5.08 nmol/L; OVCAR5 IC50 = 3.66 nmol/L) were highly sensitive to NTX-301 compared with fallopian tube epithelial cells. NTX-301 downregulated expression of DNA methyltransferases 1-3 and induced transcriptomic reprogramming with 15,000 differentially expressed genes (DEG, P < 0.05). Among them, Gene Ontology enrichment analysis identified regulation of fatty acid biosynthesis and molecular functions related to aldehyde dehydrogenase (ALDH) and oxidoreductase, known features of cancer stem cells. Low-dose NTX-301 reduced the ALDH(+) cell population and expression of stemness-associated transcription factors. Stearoyl-coenzyme A desaturase 1 (SCD), which regulates production of unsaturated fatty acids (UFA), was among the top DEG downregulated by NTX-301. NTX-301 treatment decreased levels of UFA and increased oxidized lipids, and this was blunted by deferoxamine, indicating cell death via ferroptosis. NTX-301-induced ferroptosis was rescued by oleic acid. In vivo, monotherapy with NTX-301 significantly inhibited ovarian cancer and patient-derived xenograft growth (P < 0.05). Decreased SCD levels and increased oxidized lipids were detected in NTX-301-treated xenografts.

conclusionsNTX-301 is active in ovarian cancer models. Our findings point to a new mechanism by which epigenetic blockade disrupts lipid homeostasis and promotes cancer cell death.

Indexed as

Ovarian NeoplasmsAldehyde DehydrogenaseCell Line, TumorDNAEnzyme InhibitorsFemaleHumansLipidsAldehyde DehydrogenaseDNAEnzyme InhibitorsLipids

Identifiers

PMID38231483
PMCPMC10947827
OpenAlexW4390940948

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.