Evidence map›Paper›PMID 38231175›Full record

ArticleChemical research in toxicology2024

Mass Spectral Library for DNA Adductomics.

Scott J Walmsley, Jingshu Guo, Anamary Tarifa, Anthony P DeCaprio, Marcus S Cooke, Robert J Turesky, Peter W Villalta

Open access · greenAbstract read
In one paragraph

Article in Chemical research in toxicology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Scott J WalmsleyInstitute for Health Informatics, University of Minnesota, Minneapolis, Minnesota 55455, United States.ORCID 0000-0003-2108-1121
Jingshu GuoMasonic Cancer Center, University of Minnesota, Minneapolis, Minnesota 55455, United States.ORCID 0000-0001-8987-6911
Anamary TarifaForensic & Analytical Toxicology Facility, Department of Chemistry and Biochemistry, Florida International University, Miami, Florida 33199, United States.
Anthony P DeCaprioForensic & Analytical Toxicology Facility, Department of Chemistry and Biochemistry, Florida International University, Miami, Florida 33199, United States.ORCID 0000-0003-1758-3604
Marcus S CookeOxidative Stress Group, Department of Molecular Biosciences, University of South Florida, Tampa, Florida 33620, United States.ORCID 0000-0003-0369-862X
Robert J TureskyMasonic Cancer Center, University of Minnesota, Minneapolis, Minnesota 55455, United States.ORCID 0000-0001-7355-9903
Peter W VillaltaMasonic Cancer Center, University of Minnesota, Minneapolis, Minnesota 55455, United States.ORCID 0000-0002-0067-3083
University of Minnesota · USFlorida International University · USUniversity of South Florida · US

Funding

Women's CancerP30CA077598 · NCI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI Douglas Yee · 1998 to 2026
$100.4M
Untargeted Analysis ResourceU2CES026533 · NIEHS · UNIVERSITY OF MINNESOTA · PI PETERSON, LISA A · 2015 to 2025
$14.0M
DNA adductomics of the urinary systemR01CA220367 · NCI · UNIVERSITY OF MINNESOTA · PI ROSENQUIST, THOMAS A, TURESKY, ROBERT J. · 2017 to 2022
$3.0M
Kidney DNA AdductomicsR01ES030765 · NIEHS · UNIVERSITY OF MINNESOTA · PI BALBO, SILVIA, TURESKY, ROBERT J. · 2020 to 2024
$2.2M
Mass Spectrometric Analytical Collaborations with Members of the Masonic Cancer Center of the University of MinnesotaR50CA211256 · NCI · UNIVERSITY OF MINNESOTA · PI Peter William Villalta · 2016 to 2026
$2.1M
Urinary DNA Adductomics for the Assessment of Exposure to Cancer Risk FactorsR01ES030557 · NIEHS · UNIVERSITY OF SOUTH FLORIDA · PI COOKE, MARCUS STANLEY, HU, CHIUNG-WEN · 2019 to 2023
$1.7M
Development of a DNA Adductome DatabaseR03ES031188 · NIEHS · UNIVERSITY OF MINNESOTA · PI WALMSLEY, SCOTT J · 2019 to 2020
$165k
NCI NIH HHS P30 CA077598NCI NIH HHS R01 CA220367NCI NIH HHS R50 CA211256NIEHS NIH HHS R01 ES030557NIEHS NIH HHS R01 ES030765NIEHS NIH HHS R03 ES031188NIEHS NIH HHS U2C ES026533
6 · The paper itself

Abstract

Endogenous electrophiles, ionizing and non-ionizing radiation, and hazardous chemicals present in the environment and diet can damage DNA by forming covalent adducts. DNA adducts can form in critical cancer driver genes and, if not repaired, may induce mutations during cell division, potentially leading to the onset of cancer. The detection and quantification of specific DNA adducts are some of the first steps in studying their role in carcinogenesis, the physiological conditions that lead to their production, and the risk assessment of exposure to specific genotoxic chemicals. Hundreds of different DNA adducts have been reported in the literature, and there is a critical need to establish a DNA adduct mass spectral database to facilitate the detection of previously observed DNA adducts and characterize newly discovered DNA adducts. We have collected synthetic DNA adduct standards from the research community, acquired MS

Indexed as

DNADNA AdductsCarcinogenesisDNA DamageHumansMass SpectrometryDNADNA Adducts

Identifiers

PMID38231175
PMCPMC10939812
OpenAlexW4390945625

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.