Evidence map›Paper›PMID 38229689›Full record

ArticleJournal of inflammation research2024

Analysis of Immune and Prognostic-Related lncRNA PRKCQ-AS1 for Predicting Prognosis and Regulating Effect in Sepsis.

Xian Ding, Wenqi Liang, Hongjuan Xia, Yuee Liu, Shuxiong Liu, Xinyu Xia, Xiaoli Zhu, Yongyan Pei, Dewen Zhang

Open access · goldAbstract read
In one paragraph

Article in Journal of inflammation research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Xian Ding *Department of Emergency, Third Affiliated Hospital of Naval Medical University, Shanghai, People's Republic of China.
Wenqi Liang *Department of Emergency, Shanghai Changhai Hospital, Naval Medical University, Shanghai, People's Republic of China.
Hongjuan Xia *Department of Emergency, Third Affiliated Hospital of Naval Medical University, Shanghai, People's Republic of China.ORCID 0000-0002-9540-6753
Yuee LiuDepartment of Emergency, Shanghai Changhai Hospital, Naval Medical University, Shanghai, People's Republic of China.
Shuxiong LiuDepartment of Emergency, Third Affiliated Hospital of Naval Medical University, Shanghai, People's Republic of China.
Xinyu XiaDepartment of Emergency, Third Affiliated Hospital of Naval Medical University, Shanghai, People's Republic of China.
Xiaoli ZhuDepartment of Emergency, Third Affiliated Hospital of Naval Medical University, Shanghai, People's Republic of China.ORCID 0009-0005-9869-6142
Yongyan PeiSchool of Chemistry and Chemical Engineering, Guangdong Pharmaceutical University, Zhongshan, People's Republic of China.ORCID 0000-0002-9660-3142
Dewen ZhangLonghua Clinical Medical College, Shanghai University of Traditional Chinese Medicine, Shanghai, People's Republic of China.
Second Military Medical University · CNGuangdong Pharmaceutical University · CNShanghai University of Traditional Chinese Medicine · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Sepsis was a high mortality and great harm systemic inflammatory response syndrome caused by infection. lncRNAs were potential prognostic marker and therapeutic target. Therefore, we expect to screen and analyze lncRNAs with potential prognostic markers in sepsis. Methods: Transcriptome sequencing and limma was used to screen dysregulated RNAs. Key RNAs were screened by correlation analysis, lncRNA-mRNA co-expression and weighted gene co-expression network analysis. Immune infiltration, gene set enrichment analysis and gene set variation analysis were used to analyze the immune correlation. Kaplan-Meier curve, receiver operator characteristic curve, Cox regression analysis and nomogram were used to analyze the correlation between key RNAs and prognosis. Sepsis model was established by lipopolysaccharide-induced HUVECs injury, and then cell viability and migration ability were detected by cell counting kit-8 and wound healing assay. The levels of apoptosis-related proteins and inflammatory cytokines were detected by RT-qPCR and Western blot. Reactive Oxygen Species and superoxide dismutase were detected by commercial kit. Results: Fourteen key differentially expressed lncRNAs and 663 key differentially expressed genes were obtained. And these lncRNAs were closely related to immune cells, especially T cell activation, immune response and inflammation. Subsequently, Subsequently, lncRNA PRKCQ-AS1 was identified as the regulator for further investigation in sepsis. RT-qPCR results showed that PRKCQ-AS1 expression was up-regulated in clinical samples and sepsis model cells, which was an independent prognostic factor in sepsis patients. Immune correlation analysis showed that PRKCQ-AS1 was involved in the immune response and inflammatory process of sepsis. Cell function tests confirmed that PRKCQ-AS1 could inhibit sepsis model cells viability and promote cell apoptosis, inflammatory damage and oxidative stress. Conclusion: We constructed immune-related lncRNA-mRNA regulatory networks in the progression of sepsis and confirmed that PRKCQ-AS1 is an important prognostic factor affecting the progression of sepsis and is involved in immune response.

Indexed as

immune-related lncRNAlncRNA-mRNAPRKCQ-AS1prognosis and progresssepsis

Identifiers

PMID38229689
PMCPMC10790647
OpenAlexW4390825361

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.