Evidence map›Paper›PMID 38228789›Full record

ArticleEMBO reports2024

An octameric PqiC toroid stabilises the outer-membrane interaction of the PqiABC transport system.

Benjamin F Cooper, Giedrė Ratkevičiūtė, Luke A Clifton, Hannah Johnston, Rachel Holyfield, David J Hardy, Simon G Caulton, William Chatterton, Pooja Sridhar, Peter Wotherspoon and 4 more

Open access · diamondAbstract read
In one paragraph

Article in EMBO reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Mce transport systems inJournal of bacteriology · 2026
    Review
  3. Article
  4. Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Benjamin F CooperSir William Dunn School of Pathology, University of Oxford, OX1 3RE, Oxford, UK.ORCID 0000-0002-4023-9011
Giedrė RatkevičiūtėDepartment of Biochemistry, University of Oxford, OX1 3QU, Oxford, UK.ORCID 0000-0003-1682-1455
Luke A CliftonISIS Pulsed Neutron & Muon Source, Science and Technology Facilities Council, Rutherford Appleton Laboratory Harwell Oxford Campus, OX11 OQX, Didcot, UK.ORCID 0000-0001-8754-362X
Hannah JohnstonSchool of Biosciences, University of Birmingham, B15 2TT, Birmingham, UK.ORCID 0009-0002-5133-891X
Rachel HolyfieldSchool of Biosciences, University of Birmingham, B15 2TT, Birmingham, UK.
David J HardySchool of Biosciences, University of Birmingham, B15 2TT, Birmingham, UK.
Simon G CaultonSchool of Biosciences, University of Birmingham, B15 2TT, Birmingham, UK.ORCID 0000-0001-7509-9728
William ChattertonSchool of Biosciences, University of Birmingham, B15 2TT, Birmingham, UK.
Pooja SridharSchool of Biosciences, University of Birmingham, B15 2TT, Birmingham, UK.ORCID 0000-0001-7933-7818
Peter WotherspoonSchool of Biosciences, University of Birmingham, B15 2TT, Birmingham, UK.
Gareth W HughesInstitute of Cancer and Genomic Sciences, University of Birmingham, B15 2TT, Birmingham, UK.
Stephen Cl HallISIS Pulsed Neutron & Muon Source, Science and Technology Facilities Council, Rutherford Appleton Laboratory Harwell Oxford Campus, OX11 OQX, Didcot, UK.
Andrew L LoveringSchool of Biosciences, University of Birmingham, B15 2TT, Birmingham, UK.ORCID 0000-0002-1856-7975
Timothy J KnowlesSchool of Biosciences, University of Birmingham, B15 2TT, Birmingham, UK. t.j.knowles@bham.ac.uk.ORCID 0000-0002-6632-0985
University of Birmingham · GBRutherford Appleton Laboratory · GBUniversity of Oxford · GBCancer Research UK Clinical Trials Unit · GB

Funding

Diamond Light Source mx26803UKRI | Biotechnology and Biological Sciences Research Council (BBSRC) BB/M01116X/1UKRI | Biotechnology and Biological Sciences Research Council (BBSRC) BB/S017283/1UKRI | STFC | ISIS Neutron and Muon Source (The ISIS Neutron and Muon Source) RB2220703UKRI | STFC | ISIS Neutron and Muon Source (The ISIS Neutron and Muon Source) RB2300004
6 · The paper itself

Abstract

The E. coli Paraquat Inducible (Pqi) Pathway is a putative Gram-negative phospholipid transport system. The pathway comprises three components: an integral inner membrane protein (PqiA), a periplasmic spanning MCE family protein (PqiB) and an outer membrane lipoprotein (PqiC). Interactions between all complex components, including stoichiometry, remain uncharacterised; nevertheless, once assembled into their quaternary complex, the trio of Pqi proteins are anticipated to provide a continuous channel between the inner and outer membranes of diderms. Here, we present X-ray structures of both the native and a truncated, soluble construct of the PqiC lipoprotein, providing insight into its biological assembly, and utilise neutron reflectometry to characterise the nature of the PqiB-PqiC-membrane interaction. Finally, we employ phenotypic complementation assays to probe specific PqiC residues, which imply the interaction between PqiB and PqiC is less intimate than previously anticipated.

Indexed as

Escherichia coliEscherichia coli ProteinsBiological TransportLipoproteinsMembrane ProteinsEscherichia coli ProteinsLipoproteinsMembrane ProteinsEnvelope SpanningGram Negative Cell EnvelopeLipid TransportOuter Membrane BiogenesisPqi

Identifiers

PMID38228789
PMCPMC10897342
OpenAlexW4390904415

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.