Evidence map›Paper›PMID 38228620›Full record

ArticleScientific data2024

Optimizing drug combination and mechanism analysis based on risk pathway crosstalk in pan cancer.

Congxue Hu, Wanqi Mi, Feng Li, Lun Zhu, Qi Ou, Maohao Li, Tengyue Li, Yuheng Ma, Yunpeng Zhang, Yingqi Xu

Abstract read
In one paragraph

Article in Scientific data, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Scaling up drug combination surface prediction.Briefings in bioinformatics · 2025
    Article
  7. Article
  8. Molecular principles underlying aggressive cancers.Signal transduction and targeted therapy · 2025
    Review
  9. Article
  10. Review
  11. Review
  12. Article
  13. Isorhamnetin: what is theFrontiers in pharmacology · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Congxue Hu *College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081, China.
Wanqi Mi *College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081, China.ORCID 0000-0002-5263-1635
Feng Li *College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081, China.
Lun ZhuCollege of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081, China.
Qi OuCollege of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081, China.
Maohao LiCollege of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081, China.
Tengyue LiCollege of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081, China.
Yuheng MaDepartment of Pharmacy, Inner Mongolia Medical University, Jinshan Development Zone, Hohhot, 010100, China.
Yunpeng ZhangCollege of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081, China.
Yingqi XuCollege of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081, China. xuyingqi1987@163.com.

Funding

Heilongjiang Postdoctoral Science Foundation LBH-Q19045National Natural Science Foundation of China (National Science Foundation of China) 61903105National Natural Science Foundation of China (National Science Foundation of China) 62172131
6 · The paper itself

Abstract

Combination therapy can greatly improve the efficacy of cancer treatment, so identifying the most effective drug combination and interaction can accelerate the development of combination therapy. Here we developed a computational network biological approach to identify the effective drug which inhibition risk pathway crosstalk of cancer, and then filtrated and optimized the drug combination for cancer treatment. We integrated high-throughput data concerning pan-cancer and drugs to construct miRNA-mediated crosstalk networks among cancer pathways and further construct networks for therapeutic drug. Screening by drug combination method, we obtained 687 optimized drug combinations of 83 first-line anticancer drugs in pan-cancer. Next, we analyzed drug combination mechanism, and confirmed that the targets of cancer-specific crosstalk network in drug combination were closely related to cancer prognosis by survival analysis. Finally, we save all the results to a webpage for query ( http://bio-bigdata.hrbmu.edu.cn/oDrugCP/ ). In conclusion, our study provided an effective method for screening precise drug combinations for various cancer treatments, which may have important scientific significance and clinical application value for tumor treatment.

Indexed as

Antineoplastic AgentsMicroRNAsNeoplasmsComputational BiologyDrug CombinationsHumansAntineoplastic AgentsDrug CombinationsMicroRNAs

Identifiers

PMID38228620
PMCPMC10791624

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.