Evidence map›Paper›PMID 38228016›Full record

ArticleDNA repair2024

Catalytic activity of OGG1 is impaired by Zinc deficiency.

Priyanka Sharma, Carmen P Wong, Emily Ho, Harini Sampath

Open access · hybridAbstract read
In one paragraph

Article in DNA repair, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.9field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Priyanka SharmaRutgers Center for Lipid Research, Rutgers University, New Brunswick, NJ, USA; Center for Microbiome, Nutrition, and Health, New Jersey Institute for Food, Nutrition, and Health, Rutgers University, New Brunswick, NJ, USA; Department of Nutritional Sciences, Rutgers University, New Brunswick, NJ, USA.
Carmen P WongLinus Pauling Institute, Oregon State University, Corvallis, OR, USA; School of Public Health and Nutrition, Oregon State University, Corvallis, OR, USA.
Emily HoLinus Pauling Institute, Oregon State University, Corvallis, OR, USA; School of Public Health and Nutrition, Oregon State University, Corvallis, OR, USA.
Harini SampathRutgers Center for Lipid Research, Rutgers University, New Brunswick, NJ, USA; Center for Microbiome, Nutrition, and Health, New Jersey Institute for Food, Nutrition, and Health, Rutgers University, New Brunswick, NJ, USA; Department of Nutritional Sciences, Rutgers University, New Brunswick, NJ, USA. Electronic address: harini.sampath@rutgers.edu.
Oregon State University · USRutgers, The State University of New Jersey · US

Funding

Zebrafish Biomedical Research Facility CoreP30ES030287 · NIEHS · OREGON STATE UNIVERSITY · PI Diana Rohlman · 2020 to 2026
$9.8M
Role of oxidative DNA damage in the onset and progression of metabolic syndromeR00DK100640 · NIDDK · RUTGERS, THE STATE UNIV OF N.J. · PI SAMPATH, HARINI · 2016 to 2018
$888k
Role of oxidative DNA damage in the onset and progression of metabolic syndromeK99DK100640 · NIDDK · OREGON HEALTH & SCIENCE UNIVERSITY · PI SAMPATH, HARINI · 2014 to 2015
$180k
NIDDK NIH HHS K99 DK100640NIDDK NIH HHS R00 DK100640NIEHS NIH HHS P30 ES030287
6 · The paper itself

Abstract

Oxidative stress-induced DNA base modifications, if unrepaired, can increase mutagenesis and genomic instability, ultimately leading to cell death. Cells predominantly use the base excision repair (BER) pathway to repair oxidatively-induced non-helix distorting lesions. BER is initiated by DNA glycosylases, such as 8-oxoguanine DNA glycosylase (OGG1), which repairs oxidatively modified guanine bases, including 7,8-dihydro-8-oxoguanine (8-oxoG) and ring-opened formamidopyrimidine lesions, 2,6-diamino-4-hydroxy-5-formamidopyrimidine (FapyG). The OGG1 protein contains a C2H2 zinc (Zn) finger DNA binding domain. However, the impact of dietary Zn deficiency on OGG1 catalytic activity has not been extensively studied. Zn is a common nutrient of concern with increasing age, and the prevalence of oxidative DNA damage is also concurrently increased during aging. Thus, understanding the potential regulation of OGG1 activity by Zn is clinically relevant. The present study investigates the impact of a range of Zn statuses, varying from severe Zn deficiency to exogenous Zn-supplementation, in the context of young and aged animals to determine the impact of dietary Zn-status on OGG1 activity and oxidative DNA damage in mice. Our findings suggest that nutritional Zn deficiency impairs OGG1 activity and function, without altering gene expression, and that aging further exacerbates these effects. These results have important implications for nutritional management of Zn during aging to mitigate age-associated DNA damage.

Indexed as

DNA GlycosylasesDNA RepairAnimalsDNADNA DamageGuanineMiceOxidative StressPyrimidinesZinc2,6-diamino-4-hydroxy-5-formamidopyrimidine7,8-dihydro-8-oxoguanineDNADNA GlycosylasesGuanineOgg1 protein, mousePyrimidinesZinc8-oxoGDNA repairOGG1Oxidative stressZinc deficiency

Identifiers

PMID38228016
PMCPMC10851324
OpenAlexW4390694184

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.