Evidence map›Paper›PMID 38225560›Full record

ReviewCellular & molecular biology letters2024

Multipronged regulation of autophagy and apoptosis: emerging role of TRIM proteins.

Nuzhat Ahsan, Mohd Shariq, Avadhesha Surolia, Reshmi Raj, Mohammad Firoz Khan, Pramod Kumar

Open access · goldAbstract readReview
In one paragraph

Review in Cellular & molecular biology letters, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 1 pooled it
20.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 1 synthesis or guideline pooled it, 53 citations in OpenAlex.

  1. Pooled it
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  8. Allele specific expression in Alzheimer's disease.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Nuzhat Ahsan *Quantlase Lab LLC, Unit 1-8, Masdar City, Abu Dhabi, UAE. nuzhat.ahsan@quantlase.ae.ORCID http://orcid.org/0000-0001-8530-4991
Mohd Shariq *Quantlase Lab LLC, Unit 1-8, Masdar City, Abu Dhabi, UAE.
Avadhesha SuroliaMolecular Biophysics Unit, Indian Institute of Science, Bangalore, 460012, India. surolia@iisc.ac.in.
Reshmi RajQuantlase Lab LLC, Unit 1-8, Masdar City, Abu Dhabi, UAE.
Mohammad Firoz KhanQuantlase Lab LLC, Unit 1-8, Masdar City, Abu Dhabi, UAE.
Pramod KumarQuantlase Lab LLC, Unit 1-8, Masdar City, Abu Dhabi, UAE.
Indian Institute of Science Bangalore · INQuantum Technologies (Sweden) · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

TRIM proteins are characterized by their conserved N-terminal RING, B-box, and coiled-coil domains. These proteins are efficient regulators of autophagy, apoptosis, and innate immune responses and confer immunity against viruses and bacteria. TRIMs function as receptors or scaffold proteins that target substrates for autophagy-mediated degradation. Most TRIMs interact with the BECN1-ULK1 complex to form TRIMosomes, thereby efficiently targeting substrates to autophagosomes. They regulate the functions of ATG proteins through physical interactions or ubiquitination. TRIMs affect the lipidation of MAP1LC3B1 to form MAP1LC3B2, which is a prerequisite for phagophore and autophagosome formation. In addition, they regulate MTOR kinase and TFEB, thereby regulating the expression of ATG genes. TRIM proteins are efficient regulators of apoptosis and are crucial for regulating cell proliferation and tumor formation. Many TRIM proteins regulate intrinsic and extrinsic apoptosis via the cell surface receptors TGFBR2, TNFRSF1A, and FAS. Mitochondria modulate the anti- and proapoptotic functions of BCL2, BAX, BAK1, and CYCS. These proteins use a multipronged approach to regulate the intrinsic and extrinsic apoptotic pathways, culminating in coordinated activation or inhibition of the initiator and executor CASPs. Furthermore, TRIMs can have a dual effect in determining cell fate and are therefore crucial for cellular homeostasis. In this review, we discuss mechanistic insights into the role of TRIM proteins in regulating autophagy and apoptosis, which can be used to better understand cellular physiology. These findings can be used to develop therapeutic interventions to prevent or treat multiple genetic and infectious diseases.

Indexed as

ApoptosisApoptosis Regulatory ProteinsAutophagyTripartite Motif ProteinsUbiquitinationApoptosis Regulatory ProteinsTripartite Motif ProteinsApoptosisAutophagosomeAutophagyAutophagy receptorBECN1E3-Ub ligaseTP53TRIM proteinsUbiquitinationULK1

Identifiers

PMID38225560
PMCPMC10790450
OpenAlexW4390909375

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.