Evidence map›Paper›PMID 38225278›Full record

ArticleNature communications2024

Evolution of optimal growth temperature in Asgard archaea inferred from the temperature dependence of GDP binding to EF-1A.

Zhongyi Lu, Runyue Xia, Siyu Zhang, Jie Pan, Yang Liu, Yuri I Wolf, Eugene V Koonin, Meng Li

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. The archaeal roots of eukaryotic life.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Mitochondria: great balls of fire.The FEBS journal · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 3 countries.

Zhongyi Lu *Archaeal Biology Center, Institute for Advanced Study, Shenzhen University, Shenzhen, 518060, China.
Runyue Xia *Archaeal Biology Center, Institute for Advanced Study, Shenzhen University, Shenzhen, 518060, China.ORCID 0000-0003-4017-4788
Siyu ZhangArchaeal Biology Center, Institute for Advanced Study, Shenzhen University, Shenzhen, 518060, China.
Jie PanArchaeal Biology Center, Institute for Advanced Study, Shenzhen University, Shenzhen, 518060, China.
Yang LiuArchaeal Biology Center, Institute for Advanced Study, Shenzhen University, Shenzhen, 518060, China.ORCID 0000-0002-1109-0756
Yuri I WolfNational Center for Biotechnology Information, National Library of Medicine, Bethesda, MD, 20894, USA.ORCID 0000-0002-0247-8708
Eugene V KooninNational Center for Biotechnology Information, National Library of Medicine, Bethesda, MD, 20894, USA.ORCID 0000-0003-3943-8299
Meng LiArchaeal Biology Center, Institute for Advanced Study, Shenzhen University, Shenzhen, 518060, China. limeng848@szu.edu.cn.ORCID 0000-0001-8675-0758
Shenzhen University · CNNational Center for Biotechnology Information · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The archaeal ancestor of eukaryotes apparently belonged to the phylum Asgardarchaeota, but the ecology and evolution of Asgard archaea are poorly understood. The optimal GDP-binding temperature of a translation elongation factor (EF-1A or EF-Tu) has been previously shown to correlate with the optimal growth temperature of diverse prokaryotes. Here, we reconstruct ancestral EF-1A sequences and experimentally measure the optimal GDP-binding temperature of EF-1A from ancient and extant Asgard archaea, to infer the evolution of optimal growth temperatures in Asgardarchaeota. Our results suggest that the Asgard ancestor of eukaryotes was a moderate thermophile, with an optimal growth temperature around 53 °C. The origin of eukaryotes appears to coincide with a transition from thermophilic to mesophilic lifestyle during the evolution of Asgard archaea.

Indexed as

ArchaeaGuanosine DiphosphatePeptide Elongation Factor 1PhylogenyTemperatureGuanosine DiphosphatePeptide Elongation Factor 1

Identifiers

PMID38225278
PMCPMC10789797
OpenAlexW4390884989

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.