Evidence map›Paper›PMID 38224487›Full record

ArticleGenetics and molecular biology2023

Comparison of genotyping methods and toxin gene profiles of Staphylococcus aureus isolates from clinical specimens.

Mariana Andrade-Figueiredo, Ana Carolina de Oliveira Luz, Vladimir da Mota Silveira Filho, Tereza Cristina Leal-Balbino

Open access · goldAbstract read
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Article in Genetics and molecular biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Mariana Andrade-FigueiredoCentro Universitário Boa Viagem Wyden (UNIFBV Wyden), Departamento de Biomedicina, Recife, PE, Brazil.ORCID http://orcid.org/0000-0002-4453-8641
Ana Carolina de Oliveira LuzFundação Oswaldo Cruz, Instituto Aggeu Magalhães (IAM), Departamento de Microbiologia, Recife, PE, Brazil.ORCID http://orcid.org/0000-0001-5323-6736
Vladimir da Mota Silveira FilhoUniversidade de Pernambuco (UPE), Departamento de Biologia, Garanhuns, PE, Brazil.ORCID http://orcid.org/0000-0002-0148-1454
Tereza Cristina Leal-BalbinoFundação Oswaldo Cruz, Instituto Aggeu Magalhães (IAM), Departamento de Microbiologia, Recife, PE, Brazil.ORCID http://orcid.org/0000-0001-7151-3514
Fundação Oswaldo Cruz · BRUniversidade de Pernambuco · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Staphylococcus aureus is a frequent cause of infections worldwide. Methicillin-resistant S. aureus (MRSA) is one of the main causes of Gram-positive infections, and methicillin-susceptible strains (MSSA) primarily colonize and infect community hosts. Multiple virulence factors are involved, with toxins playing a significant role in several diseases. In this study, we assess the prevalence of toxin genes in 89 S. aureus clinical isolates (31 MRSA and 58 MSSA). We evaluated the discriminatory power of the association of internal transcribed spacer-PCR (ITS-PCR) and 3'- end coa gene ( coa-PCR) when compared with other more commonly used and costly techniques. The isolates showed a high level of genetic diversity, and toxins were found in all the isolates. While most toxin classes displayed no statistically significant correlations and were equally distributed in isolates regardless of their resistance status, classic enterotoxins ( sea-see) showed a positive correlation with MSSA isolates. The combination of coa-PCR with ITS-PCR showed a discriminatory index of 0.84, discriminating 22 genotypes that agree with previously determined data by PFGE and MLST. This association between the two PCR-based methods suggests that they can be useful for an initial molecular epidemiological investigation of S. aureus in hospitals, providing significant information while requiring fewer resources.

Identifiers

PMID38224487
PMCPMC10789239
OpenAlexW4389892171

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.