Evidence map›Paper›PMID 38223339›Full record

ArticleClinical kidney journal2024

Single-cell transcriptomes of kidneys in a 6-month-old boy with Denys-Drash syndrome reveal stromal cell heterogeneity in the tumor microenvironment.

Tao Li, Jiangfeng Zhou, Haiyan Wu, Xiucheng Gao, Qiyang Shen, Rui Cheng, Mingshun Zhang

Open access · goldAbstract read
In one paragraph

Article in Clinical kidney journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it, 4 citations in OpenAlex.

  1. Pooled it
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Tao LiDepartment of Oncology Surgery, Children's Hospital of Nanjing Medical University, Nanjing, China.
Jiangfeng ZhouDepartment of Oncology Surgery, Children's Hospital of Nanjing Medical University, Nanjing, China.
Haiyan WuDepartment of Pathology, Children's Hospital of Nanjing Medical University, Nanjing, China.
Xiucheng GaoDepartment of Radiology, Children's Hospital of Nanjing Medical University, Nanjing, China.
Qiyang ShenDepartment of Pediatric Surgery, Children's Hospital of Nanjing Medical University, Nanjing, China.
Rui ChengDepartment of Neonatal Medical Center, Children's Hospital of Nanjing Medical University, Nanjing, China.
Mingshun ZhangNHC Key Laboratory of antibody technique, Department of Immunology, Nanjing Medical University, Nanjing, China.ORCID https://orcid.org/0000-0001-5925-0168
Nanjing Children's Hospital · CNNanjing Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Denys-Drash syndrome (DDS) is a rare disease characterized with pseudohermaphroditism, nephroblastoma (also known as Wilms tumor), and diffuse mesangial sclerosis. The therapy for DDS is largely supportive, i.e. surgery and chemotherapy for Wilms tumor and renal replacement therapy. Due to the limited understanding of the pathogenesis, precision therapy for DDS is yet to be explored. We sought to explore the cellular components and interactions in kidney tissues from an infant with DDS. Methods: Whole-exome sequencing was performed to examine the mutations associated with DDS. Single-cell RNA sequencing (scRNA-seq) was performed to explore the heterogenicity of kidney tissue samples. Results: A 6-month-old infant with bilateral Wilms tumors and genital ambiguity was diagnosed as having DDS. Whole exome sequencing revealed a novel Conclusions: A novel mutation (p.F185fs*118) in exon 1 of

Indexed as

Denys-Drash syndromesingle-cell RNA-Seqtumor microenvironmentwhole exome sequencingWilms tumor

Identifiers

PMID38223339
PMCPMC10784922
OpenAlexW4388556583

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.