Evidence map›Paper›PMID 38223000›Full record

ArticleIndian journal of clinical biochemistry : IJCB2024

Homeodomain Transcription Factors Nkx2.2 and Pax6 as Novel Biomarkers for Meningioma Tumor Treatment.

Shirin Farheen, Mubeena Mariyath Pm, Suhailur Rehman, Md Fakhrul Hoda, Yakhlesh Gupta, Asif Ali, Kunzang Chosdol, Mehdi H Shahi

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In one paragraph

Article in Indian journal of clinical biochemistry : IJCB, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 57% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Shirin FarheenInterdisciplinary Brain Research Centre, J. N. Medical College, Faculty of Medicine, Aligarh Muslim University (A.M.U), Aligarh, 202002 Uttra Pradesh India.
Mubeena Mariyath PmInterdisciplinary Brain Research Centre, J. N. Medical College, Faculty of Medicine, Aligarh Muslim University (A.M.U), Aligarh, 202002 Uttra Pradesh India.
Suhailur RehmanDepartment of Pathology, J. N. Medical College, Faculty of Medicine, Aligarh Muslim University, Aligarh, India.
Md Fakhrul HodaDepartment of Neurosurgery, J. N. Medical College, Faculty of Medicine, Aligarh Muslim University, Aligarh, India.
Yakhlesh GuptaDepartment of Biochemistry, All India Institute of Medical Sciences, New Delhi, India.
Asif AliInterdisciplinary Brain Research Centre, J. N. Medical College, Faculty of Medicine, Aligarh Muslim University (A.M.U), Aligarh, 202002 Uttra Pradesh India.
Kunzang ChosdolDepartment of Biochemistry, All India Institute of Medical Sciences, New Delhi, India.
Mehdi H ShahiInterdisciplinary Brain Research Centre, J. N. Medical College, Faculty of Medicine, Aligarh Muslim University (A.M.U), Aligarh, 202002 Uttra Pradesh India.ORCID 0000-0001-9589-4382
Aligarh Muslim University · INAll India Institute of Medical Sciences · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Meningioma is a common brain tumour which has neither a specific detection nor treatment method. The Sonic hedgehog (Shh) cell signaling pathway is a crucial regulatory pathway of mammalian organogenesis and tumorigenesis including meningioma. Shh cell signalling pathway cascade function by main transcription factor Gli1 and which further regulates in its downstream to Pax6 and Nkx2.2. This current study is aimed to explore the regulation of the Sonic hedgehog-Gli1 cell signaling pathway and its potential downstream targets in meningioma samples. A total of 24 surgically resected meningioma samples were used in this current study.Cytological changes were assessed using electron microscopic techniques as well as hematoxylin & eosin and DAPI staining. The expression pattern of Gli1, Nkx2.2 and Pax6 transcription factors were determined by using immunohistochemistry. The mRNA expression was assessed using RT-qPCR assays. Later, the whole transcriptome analysis of samples was performed with the amploseq technique. Results were compared with those obtained in normal human brain tissue (or normal meninges). Compared to the normal human brain tissue, meningioma samples showed crowded nuclei with morphological changes. Transcription factor Nkx2.2 expressed highly in all samples (24/24, 100%). Twenty-one of the 24 meningiomas (88%) showed high Gli1 and Pax6 expression. Whole transcriptome analysis of two meningioma samples also exhibited a very high increase in Gli1 expression signal in meningioma samples as compare to normal control. Hence, we may conclude that the Shh-Gli1 pathway is aberrantly activated in meningioma cells and is canonically upregulating the expression of transcription factors Pax6 and Nkx2.2. Supplementary Information: The online version contains supplementary material available at 10.1007/s12291-022-01085-1.

Indexed as

Brain tumorGli1MeningiomaNkx2.2Pax6Sonic hedgehog

Identifiers

PMID38223000
PMCPMC10784245
OpenAlexW4293695235

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.