Evidence map›Paper›PMID 38222468›Full record

ArticlePNAS nexus2024

Computer simulations predict the impact of neuronal atrophy on the calcium dynamics in Huntington's disease.

Sara Sameni, Thomas M Bartol, Jody Corey-Bloom, Terrence J Sejnowski

Open access · goldAbstract read
In one paragraph

Article in PNAS nexus, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 77% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Sara SameniDivision of Biological Sciences, University of California, San Diego, CA 92093, USA.ORCID https://orcid.org/0009-0003-9845-4085
Thomas M BartolComputational Neurobiology Laboratory, Salk Institute, La Jolla, CA 92037, USA.
Jody Corey-BloomDepartment of Neurosciences, University of California San Diego, San Diego, CA 92093, USA.
Terrence J SejnowskiDivision of Biological Sciences, University of California, San Diego, CA 92093, USA.ORCID https://orcid.org/0000-0002-0622-7391
Salk Institute for Biological Studies · USUniversity of California San Diego · US

Funding

CRCNS: Regulation of assembly and disassembly of the postsynaptic density during synaptic plasticity and its effect on AMPAR trappingR01MH129066 · NIMH · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI KENNEDY, MARY B, SEJNOWSKI, TERRENCE J · 2021 to 2024
$1.2M
NIMH NIH HHS R01 MH129066
6 · The paper itself

Abstract

One of the early hallmarks of Huntington's disease (HD) is neuronal cell atrophy, especially in the striatum, underlying motor dysfunction in HD. Here using a computer model, we have predicted the impact of cell shrinkage on calcium dynamics at the cellular level. Our model indicates that as cytosolic volume decreases, the amplitude of calcium transients increases and the endoplasmic reticulum (ER) becomes more leaky due to calcium-induced calcium release and a "toxic" positive feedback mechanism mediated by ryanodine receptors that greatly increases calcium release into the cytosol. The excessive calcium release from ER saturates the calcium buffering capacity of calbindin and forces further accumulation of free calcium in the cytosol and cellular compartments including mitochondria. This leads to imbalance of calcium in both cytosol and ER regions. Excessive calcium accumulation in the cytosol can damage the mitochondria resulting in metabolic dysfunction in the cell consistent with the pathology of HD. Our computational model points toward potential drug targets and can accelerate and greatly help the experimental studies of HD paving the way for treatments of patients suffering from HD.

Indexed as

agingbiomarkerscalcium metabolismcomputational modelHuntington's disease

Identifiers

PMID38222468
PMCPMC10785038
OpenAlexW4390061182

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.