Evidence map›Paper›PMID 38222429›Full record

ArticleAMIA ... Annual Symposium proceedings. AMIA Symposium2023

Standardizing Multi-site Clinical Note Titles to LOINC Document Ontology: A Transformer-based Approach.

Xu Zuo, Yujia Zhou, Jon Duke, George Hripcsak, Nigam Shah, Juan M Banda, Ruth Reeves, Timothy Miller, Lemuel R Waitman, Karthik Natarajan and 1 more

Abstract read
In one paragraph

Article in AMIA ... Annual Symposium proceedings. AMIA Symposium, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Xu ZuoUniversity of Texas Health Science Center at Houston, Houston, TX, USA.
Yujia ZhouUniversity of Texas Health Science Center at Houston, Houston, TX, USA.
Jon DukeGeorgia Institute of Technology, Atlanta, GA, USA.
George HripcsakColumbia University, New York City, NY, USA.
Nigam ShahStanford University, Stanford, CA, USA.
Juan M BandaGeorgia State University, Atlanta, GA, USA.
Ruth ReevesVanderbilt University Medical Center, Nashville, TN, USA.
Timothy MillerBoston Children's Hospital, Boston, MA, USA.
Lemuel R WaitmanUniversity of Missouri, Columbia, MO, USA.
Karthik NatarajanColumbia University, New York City, NY, USA.
Hua XuYale University, New Haven, CT, USA.

Funding

Enhancing All of Us Data Resources for Nutrition Precision Health: the All of Us Data and Research CenterU2COD023196 · OD · VANDERBILT UNIVERSITY MEDICAL CENTER · PI GLAZER, DAVID, HARRIS, PAUL A. · 2016 to 2022
$143.7M
Leveraging Longitudinal Data and Informatics Technology to Understand the Role of Bilingualism in Cognitive Resilience, Aging and DementiaR01AG080429 · NIA · BRIGHAM AND WOMEN'S HOSPITAL · PI Michelle L Dossett, HUA XU · 2023 to 2026
$5.5M
Facilitate Observational Studies of Alzheimer's Disease and Alzheimer's Disease-Related Dementias Using Ontology and Natural Language ProcessingRF1AG072799 · NIA · YALE UNIVERSITY · PI LIU, HONGFANG, TAO, CUI · 2021 to 2021
$2.4M
Facilitate Observational Studies of Alzheimer's Disease and Alzheimer's Disease-Related Dementias Using Ontology and Natural Language ProcessingR01AG072799 · NIA · YALE UNIVERSITY · PI HONGFANG LIU, Cui Tao · 2025 to 2026
$1.7M
NIA NIH HHS R01 AG072799NIA NIH HHS R01 AG080429NIA NIH HHS RF1 AG072799NIH HHS U2C OD023196
6 · The paper itself

Abstract

The types of clinical notes in electronic health records (EHRs) are diverse and it would be great to standardize them to ensure unified data retrieval, exchange, and integration. The LOINC Document Ontology (DO) is a subset of LOINC that is created specifically for naming and describing clinical documents. Despite the efforts of promoting and improving this ontology, how to efficiently deploy it in real-world clinical settings has yet to be explored. In this study we evaluated the utility of LOINC DO by mapping clinical note titles collected from five institutions to the LOINC DO and classifying the mapping into three classes based on semantic similarity between note t

Indexed as

Electronic Health RecordsLogical Observation Identifiers Names and CodesHumansInformation Storage and RetrievalSemantics

Identifiers

PMID38222429
PMCPMC10785935

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.