Evidence map›Paper›PMID 38222329›Full record

ArticleAMIA ... Annual Symposium proceedings. AMIA Symposium2023

Mapping Clinical Documents to the

Huzaifa Khan, Abu Saleh Mohammad Mosa, Vyshnavi Paka, Md Kamruz Zaman Rana, Vasanthi Mandhadi, Soliman Islam, Hua Xu, James C McClay, Sraboni Sarker, Praveen Rao and 1 more

Abstract read
In one paragraph

Article in AMIA ... Annual Symposium proceedings. AMIA Symposium, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Huzaifa KhanMU Institute of Data Science and Informatics, University of Missouri-Columbia.
Abu Saleh Mohammad MosaDepartment of Health Management and Informatics, School of Medicine, University of Missouri-Columbia.
Vyshnavi PakaDepartment of Health Management and Informatics, School of Medicine, University of Missouri-Columbia.
Md Kamruz Zaman RanaDepartment of Health Management and Informatics, School of Medicine, University of Missouri-Columbia.
Vasanthi MandhadiDepartment of Health Management and Informatics, School of Medicine, University of Missouri-Columbia.
Soliman IslamDepartment of Health Management and Informatics, School of Medicine, University of Missouri-Columbia.
Hua XuYale University, New Haven, CT, USA.
James C McClayDepartment of Health Management and Informatics, School of Medicine, University of Missouri-Columbia.
Sraboni SarkerDepartment of Electrical and Computer Science, School of Engineering, University of Missouri-Columbia.
Praveen RaoDepartment of Electrical and Computer Science, School of Engineering, University of Missouri-Columbia.
Lemuel R WaitmanDepartment of Health Management and Informatics, School of Medicine, University of Missouri-Columbia.

Funding

Washington University Center for Diabetes Translation Research P30DK092950 · NIDDK · WASHINGTON UNIVERSITY · PI Ross C Brownson, Debra Haire-Joshu · 2011 to 2026
$11.7M
NIDDK NIH HHS P30 DK092950
6 · The paper itself

Abstract

As Electronic Health Record (EHR) systems increase in usage, organizations struggle to maintain and categorize clinical documentation so it can be used for clinical care and research. While prior research has often employed natural language processing techniques to categorize free text documents, there are shortcomings relative to computational scalability and the lack of key metadata within notes' text. This study presents a framework that can allow institutions to map their notes to the LOINC document ontology using a Bag of Words approach. After preliminary manual value- set mapping, an automated pipeline that leverages key dimensions of metadata from structured EHR fields aligns the notes with the dimensions of the document ontology. This framework resulted in 73.4% coverage of EHR documents, while also mapping 132 million notes in less than 2 hours; an order of magnitude more efficient than NLP based methods.

Indexed as

Electronic Health RecordsLogical Observation Identifiers Names and CodesDocumentationHumansMetadata

Identifiers

PMID38222329
PMCPMC10785913

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.