Evidence map›Paper›PMID 38221776›Full record

ArticleStatistics in medicine2024

A Bayesian framework for modeling COVID-19 case numbers through longitudinal monitoring of SARS-CoV-2 RNA in wastewater.

Xiaotian Dai, Nicole Acosta, Xuewen Lu, Casey R J Hubert, Jangwoo Lee, Kevin Frankowski, Maria A Bautista, Barbara J Waddell, Kristine Du, Janine McCalder and 13 more

Abstract read
In one paragraph

Article in Statistics in medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. The potential of long-term wastewater-based surveillance to predict COVID-19 waves peak in Mexico.Water environment research : a research publication of the Water Environment Federation · 2025
    Article
  4. Observational
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Xiaotian DaiDepartment of Mathematics, Illinois State University, Normal, Illinois, USA.ORCID 0000-0003-3203-8110
Nicole AcostaDepartment of Microbiology, Immunology and Infectious Diseases, University of Calgary, Calgary, Alberta, Canada.
Xuewen LuDepartment of Mathematics and Statistics, University of Calgary, Calgary, Alberta, Canada.
Casey R J HubertDepartment of Biological Science, University of Calgary, Calgary, Alberta, Canada.
Jangwoo LeeDepartment of Microbiology, Immunology and Infectious Diseases, University of Calgary, Calgary, Alberta, Canada.
Kevin FrankowskiAdvancing Canadian Water Assets, University of Calgary, Calgary, Alberta, Canada.
Maria A BautistaDepartment of Biological Science, University of Calgary, Calgary, Alberta, Canada.
Barbara J WaddellDepartment of Microbiology, Immunology and Infectious Diseases, University of Calgary, Calgary, Alberta, Canada.
Kristine DuDepartment of Microbiology, Immunology and Infectious Diseases, University of Calgary, Calgary, Alberta, Canada.
Janine McCalderDepartment of Microbiology, Immunology and Infectious Diseases, University of Calgary, Calgary, Alberta, Canada.
Jon MeddingsDepartment of Medicine, Cumming School of Medicine, University of Calgary, Calgary, Alberta, Canada.
Norma RueckerWater Services, City of Calgary, Calgary, Alberta, Canada.
Tyler WilliamsonDepartment of Community Health Sciences, University of Calgary, Calgary, Alberta, Canada.
Danielle A SouthernDepartment of Community Health Sciences, University of Calgary, Calgary, Alberta, Canada.
Jordan HollmanDepartment of Geosciences, University of Calgary, Calgary, Alberta, Canada.
Gopal AchariDepartment of Civil Engineering, University of Calgary, Calgary, Alberta, Canada.
M Cathryn RyanDepartment of Geosciences, University of Calgary, Calgary, Alberta, Canada.
Steve E HrudeyDepartment of Laboratory Medicine and Pathology, University of Alberta, Edmonton, Alberta, Canada.
Bonita E LeeDepartment of Pediatrics, University of Alberta, Edmonton, Alberta, Canada.
Xiaoli PangDepartment of Laboratory Medicine and Pathology, University of Alberta, Edmonton, Alberta, Canada.
Rhonda G ClarkDepartment of Biological Science, University of Calgary, Calgary, Alberta, Canada.
Michael D ParkinsDepartment of Microbiology, Immunology and Infectious Diseases, University of Calgary, Calgary, Alberta, Canada.
Thierry ChekouoDepartment of Mathematics and Statistics, University of Calgary, Calgary, Alberta, Canada.ORCID 0000-0002-3594-9182

Funding

Interpretable Bayesian Non-linear statistical learning models for multi-omics data integrationR35GM150537 · NIGMS · UNIVERSITY OF MINNESOTA · PI Thierry Chekouo Tekougang · 2023 to 2026
$1.5M
CIHR 448242NIGMS NIH HHS 1R35GM150537-01NIGMS NIH HHS R35 GM150537
6 · The paper itself

Abstract

Wastewater-based surveillance has become an important tool for research groups and public health agencies investigating and monitoring the COVID-19 pandemic and other public health emergencies including other pathogens and drug abuse. While there is an emerging body of evidence exploring the possibility of predicting COVID-19 infections from wastewater signals, there remain significant challenges for statistical modeling. Longitudinal observations of viral copies in municipal wastewater can be influenced by noisy datasets and missing values with irregular and sparse samplings. We propose an integrative Bayesian framework to predict daily positive cases from weekly wastewater observations with missing values via functional data analysis techniques. In a unified procedure, the proposed analysis models severe acute respiratory syndrome coronavirus-2 RNA wastewater signals as a realization of a smooth process with error and combines the smooth process with COVID-19 cases to evaluate the prediction of positive cases. We demonstrate that the proposed framework can achieve these objectives with high predictive accuracies through simulated and observed real data.

Indexed as

COVID-19Bayes TheoremHumansPandemicsRNA, ViralSARS-CoV-2WastewaterRNA, ViralWastewaterBayesian negative binomial regressionBayesian Poisson regressionfunctional data analysisSARS-CoV-2wastewater epidemiology

Identifiers

PMID38221776
PMCPMC11239317

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.