Evidence map›Paper›PMID 38221748›Full record

ArticleThe plant genome2024

Genome-wide association mapping for field spot blotch resistance in South Asian spring wheat genotypes.

Umesh Kamble, Xinyao He, Sudhir Navathe, Manjeet Kumar, Madhu Patial, Muhammad Rezaul Kabir, Gyanendra Singh, Gyanendra Pratap Singh, Arun Kumar Joshi, Pawan Kumar Singh

Open access · goldAbstract read
In one paragraph

Article in The plant genome, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
3.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Transcriptome analyses revealPhysiology and molecular biology of plants : an international journal of functional plant biology · 2025
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 7 institutions in 3 countries.

Umesh KambleICAR-Indian Institute of Wheat and Barley Research, Karnal, Haryana, India.
Xinyao HeInternational Maize and Wheat Improvement Centre (CIMMYT) Apedo, Mexico City, Mexico.
Sudhir NavatheAgharkar Research Institute, Pune, India.ORCID https://orcid.org/0000-0002-8040-5563
Manjeet KumarICAR-Indian Agricultural Research Institute, New Delhi, India.
Madhu PatialICAR-Indian Agricultural Research Institute, New Delhi, India.
Muhammad Rezaul KabirBangladesh Wheat and Maize Research Institute (BWMRI), Dinajpur, Bangladesh.
Gyanendra SinghICAR-Indian Institute of Wheat and Barley Research, Karnal, Haryana, India.
Gyanendra Pratap SinghICAR-National Bureau of Plant Genetic Resources, New Delhi, India.
Arun Kumar JoshiBorlaug Institute for South Asia, New Delhi, India.
Pawan Kumar SinghInternational Maize and Wheat Improvement Centre (CIMMYT) Apedo, Mexico City, Mexico.ORCID https://orcid.org/0000-0003-4610-3120
Centro Internacional de Mejoramiento de Maíz Y Trigo · MXIndian Agricultural Research Institute · INNational Bureau of Plant Genetic Resources · INAgharkar Research Institute · INBangladesh Wheat and Maize Research Institute · BDBorlaug Institute for South Asia · INIndian Institute of Wheat and Barley Research · IN

Funding

Indian Council of Agriculture Research, India
6 · The paper itself

Abstract

Spot blotch caused by Bipolaris sorokiniana ((Sacc.) Shoemaker) (teleomorph: Cochliobolus sativus [Ito and Kuribayashi] Drechsler ex Dastur) is an economically important disease of warm and humid regions. The present study focused on identifying resistant genotypes and single-nucleotide polymorphism (SNP) markers associated with spot blotch resistance in a panel of 174 bread spring wheat lines using field screening and genome-wide association mapping strategies. Field experiments were conducted in Agua Fria, Mexico, during the 2019-2020 and 2020-2021 cropping seasons. A wide range of phenotypic variation was observed among genotypes tested during both years. Twenty SNP markers showed significant association with spot blotch resistance on 15 chromosomes, namely, 1A, 1B, 2A, 2B, 2D, 3A, 3B, 4B, 4D, 5A, 5B, 6A, 6B, 7A, and 7B. Of these, two consistently significant SNPs on 5A, TA003225-0566 and TA003225-1427, may represent a new resistance quantitative trait loci. Further, in the proximity of Tsn1 on 5B, AX-94435238 was the most stable and consistent in both years. The identified genomic regions could be deployed to develop spot blotch-resistant genotypes, particularly in the spot blotch-vulnerable wheat growing areas.

Indexed as

BipolarisGenome-Wide Association StudyTriticumDisease ResistanceGenotypePhenotypePlant DiseasesSeasons

Identifiers

PMID38221748
PMCPMC12806907
OpenAlexW4390881657

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.