Evidence map›Paper›PMID 38215789›Full record

SynthesisHuman molecular genetics2024

Identifying BMI-associated genes via a genome-wide multi-omics integrative approach using summary data.

Jingxian Tang, Hanfei Xu, Zihao Xin, Quanshun Mei, Musong Gao, Tiantian Yang, Xiaoyu Zhang, Daniel Levy, Ching-Ti Liu

Open access · greenAbstract readMeta-Analysis
In one paragraph

Synthesis in Human molecular genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Management of Childhood Obesity.International journal of molecular sciences · 2026
    Review
  2. Multiomics of Human Obesity and Related Multisystem Diseases.The Journal of clinical endocrinology and metabolism · 2026
    Article
  3. Review
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Jingxian TangDepartment of Biostatistics, Boston University School of Public Health, 801 Massachusetts Ave, Boston, MA 02118, United States.
Hanfei XuDepartment of Biostatistics, Boston University School of Public Health, 801 Massachusetts Ave, Boston, MA 02118, United States.
Zihao XinDepartment of Biostatistics, Boston University School of Public Health, 801 Massachusetts Ave, Boston, MA 02118, United States.
Quanshun MeiDepartment of Biostatistics, Boston University School of Public Health, 801 Massachusetts Ave, Boston, MA 02118, United States.
Musong GaoDepartment of Biostatistics, Boston University School of Public Health, 801 Massachusetts Ave, Boston, MA 02118, United States.
Tiantian YangDepartment of Biostatistics, Boston University School of Public Health, 801 Massachusetts Ave, Boston, MA 02118, United States.
Xiaoyu ZhangDepartment of Biostatistics, Boston University School of Public Health, 801 Massachusetts Ave, Boston, MA 02118, United States.
Daniel LevyFramingham Heart Study, National Heart, Lung, and Blood Institute's Framingham Heart Study, 73 Mt Wayte Ave, Framingham, MA, United States.
Ching-Ti LiuDepartment of Biostatistics, Boston University School of Public Health, 801 Massachusetts Ave, Boston, MA 02118, United States.ORCID 0000-0002-0703-0742
Boston University · USNational Institutes of Health · US

Funding

Integrative Approaches to Identifying Function and Clinical Significance of Adiposity Susceptibility GenesR01DK122503 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Anne Justice, Ching-Ti Liu · 2020 to 2026
$4.5M
THE FRAMINGHAM HEART STUDY-N01HC25195-268025195-268025195N01HC025195 · HC · TRUSTEES OF BOSTON UNIVERSITY · PI WOLF, PHILIP A · 2002 to 2006
–
NHLBI NIH HHS HHSN268201500001CNHLBI NIH HHS HHSN268201500001INHLBI NIH HHS N01 HC025195NHLBI NIH HHS N01-HC-25195NIDDK NIH HHS R01 DK122503NIDDK NIH HHS R01DK122503
6 · The paper itself

Abstract

objectiveThis study aims to identify BMI-associated genes by integrating aggregated summary information from different omics data.

methodsWe conducted a meta-analysis to leverage information from a genome-wide association study (n = 339 224), a transcriptome-wide association study (n = 5619), and an epigenome-wide association study (n = 3743). We prioritized the significant genes with a machine learning-based method, netWAS, which borrows information from adipose tissue-specific interaction networks. We also used the brain-specific network in netWAS to investigate genes potentially involved in brain-adipose interaction.

resultsWe identified 195 genes that were significantly associated with BMI through meta-analysis. The netWAS analysis narrowed down the list to 21 genes in adipose tissue. Among these 21 genes, six genes, including FUS, STX4, CCNT2, FUBP1, NDUFS3, and RAPSN, were not reported to be BMI-associated in PubMed or GWAS Catalog. We also identified 11 genes that were significantly associated with BMI in both adipose and whole brain tissues.

conclusionThis study integrated three types of omics data and identified a group of genes that have not previously been reported to be associated with BMI. This strategy could provide new insights for future studies to identify molecular mechanisms contributing to BMI regulation.

Indexed as

Genome-Wide Association StudyMultiomicsBody Mass IndexCyclin TDNA-Binding ProteinsHumansObesityRNA-Binding ProteinsTranscriptomeCCNT2 protein, humanCyclin TDNA-Binding ProteinsFUBP1 protein, humanRNA-Binding ProteinsexpressionGWASmethylationobesityomics

Identifiers

PMID38215789
PMCPMC11000658
OpenAlexW4390848943

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.