Evidence map›Paper›PMID 38214767›Full record

ArticleArchives of virology2024

Complete sequence and genome characterization of miscanthus virus M, a new betaflexivirus from Miscanthus sp.

Peter Abrahamian, Samuel Grinstead, Gary R Kinard, Ricardo Goenaga, Philippe Rott, Dimitre Mollov

Abstract read
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In one paragraph

Article in Archives of virology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.6field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Peter AbrahamianUSDA-ARS National Germplasm Resources Laboratory, Beltsville, MD, USA. peter.abrahamian@usda.gov.ORCID http://orcid.org/0000-0002-9613-2838
Samuel GrinsteadUSDA-ARS National Germplasm Resources Laboratory, Beltsville, MD, USA.ORCID http://orcid.org/0000-0002-1708-8235
Gary R KinardUSDA-ARS National Germplasm Resources Laboratory, Beltsville, MD, USA.
Ricardo GoenagaUSDA-ARS Tropical Agriculture Research Station, Mayaguez, PR, USA.ORCID http://orcid.org/0000-0002-9210-9091
Philippe RottCIRAD, UMR PHIM, Montpellier, France.ORCID http://orcid.org/0000-0001-6085-6159
Dimitre MollovUSDA-ARS National Germplasm Resources Laboratory, Beltsville, MD, USA. dimitre.mollov@usda.gov.ORCID http://orcid.org/0000-0002-4750-6194
Agricultural Research Service · USNational Agricultural Library · USCentre de Coopération Internationale en Recherche Agronomique pour le Développement · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A novel betaflexivirus, tentatively named "miscanthus virus M" (MiVM), was isolated from Miscanthus sp. The complete genome of MiVM is 7,388 nt in length (excluding the poly(A) tail). It contains five open reading frames and has a genome organization similar to those of members of the families Alphaflexiviridae and Betaflexiviridae (subfamily Quinvirinae). The amino acid sequences of both the replicase and coat protein shared less than 45% identity with the corresponding sequences of members of either family. Phylogenetic analysis confirmed that MiVM belongs to the family Betaflexiviridae and subfamily Quinvirinae but it was too distantly related to be included in any currently recognized genus in this family. We therefore propose that miscanthus virus M represents a new species and a new genus in the family Betaflexiviridae.

Indexed as

FlexiviridaeGenome, ViralAmino Acid SequenceHumansOpen Reading FramesPhylogenyPlant DiseasesRNA, ViralRNA, Viral

Identifiers

PMID38214767
OpenAlexW4390791620

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.