Evidence map›Paper›PMID 38213787›Full record

ArticleiScience2023

mRNA COVID-19 vaccine elicits potent adaptive immune response without the acute inflammation of SARS-CoV-2 infection.

Ellie N Ivanova, Jasmine Shwetar, Joseph C Devlin, Terkild B Buus, Sophie Gray-Gaillard, Akiko Koide, Amber Cornelius, Marie I Samanovic, Alberto Herrera, Eleni P Mimitou and 11 more

Open access · goldAbstract read
In one paragraph

Article in iScience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Inflammation durably imprints memory CD4+ T cells.bioRxiv : the preprint server for biology · 2023
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

21 authors at 4 institutions in 2 countries.

Ellie N IvanovaDepartment of Pathology, New York University Grossman School of Medicine, New York, NY 10016, USA.
Jasmine ShwetarInstitute of Systems Genetics, New York University Grossman School of Medicine, New York, NY 10016, USA.
Joseph C DevlinInstitute of Systems Genetics, New York University Grossman School of Medicine, New York, NY 10016, USA.
Terkild B BuusDepartment of Pathology, New York University Grossman School of Medicine, New York, NY 10016, USA.
Sophie Gray-GaillardNew York University Langone Vaccine Center, New York University Langone Health, New York, NY 10016, USA.
Akiko KoideDepartment of Medicine, New York University Grossman School of Medicine, New York, NY 10016, USA.
Amber CorneliusNew York University Langone Vaccine Center, New York University Langone Health, New York, NY 10016, USA.
Marie I SamanovicNew York University Langone Vaccine Center, New York University Langone Health, New York, NY 10016, USA.
Alberto HerreraDepartment of Pathology, New York University Grossman School of Medicine, New York, NY 10016, USA.
Eleni P MimitouNew York Genome Center, New York, NY 10013, USA.
Chenzhen ZhangVilcek Institute of Graduate Biomedical Sciences, New York University Grossman School of Medicine, New York, NY 10016, USA.
Trishala KarmacharyaNew York University Langone Vaccine Center, New York University Langone Health, New York, NY 10016, USA.
Ludovic DesvignesNew York University Langone Vaccine Center, New York University Langone Health, New York, NY 10016, USA.
Niels ØdumLEO Foundation Skin Immunology Research Center, Department of Immunology and Microbiology, University of Copenhagen, 2200 Copenhagen, Denmark.
Peter SmibertNew York Genome Center, New York, NY 10013, USA.
Robert J UlrichNew York University Langone Vaccine Center, New York University Langone Health, New York, NY 10016, USA.
Mark J MulliganNew York University Langone Vaccine Center, New York University Langone Health, New York, NY 10016, USA.
Shohei KoidePerlmutter Cancer Center, New York University Langone Health, New York, NY 10016, USA.
Kelly V RugglesInstitute of Systems Genetics, New York University Grossman School of Medicine, New York, NY 10016, USA.
Ramin S HeratiNew York University Langone Vaccine Center, New York University Langone Health, New York, NY 10016, USA.
Sergei B KoralovDepartment of Pathology, New York University Grossman School of Medicine, New York, NY 10016, USA.
NYU Langone Health · USNew York University · USNew York Genome Center · USUniversity of Copenhagen · DK

Funding

Project-005UL1TR001445 · NCATS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI BREDELLA, MIRIAM ANTOINETTE, HOCHMAN, JUDITH S · 2015 to 2025
$103.5M
Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI MARK Reid PHILIPS · 1985 to 2026
$83.1M
Virology CoreU19AI082630 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI GEORG Michael LAUER · 2009 to 2026
$48.1M
Establishment of the New York University Vaccine and Treatment Evaluation Unit (NYU VTEU) - DMID 21-0012UM1AI148574 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Angelica Cifuentes Kottkamp, Anoma Nellore · 2020 to 2026
$23.9M
Probing RAS-mediated Signaling with Monobody InhibitorsR01CA212608 · NCI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI SHOHEI KOIDE, John P O'Bryan · 2017 to 2026
$5.8M
Microbial triggers and molecular mechanisms of Th17 mediated airway inflammation-Resubmission-1R01HL125816 · NHLBI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI KORALOV, SERGEI BORISOVICH · 2015 to 2019
$3.3M
Research and Development to Establish a Small Animal Model as a Significant Resource of High-Value Single-Domain AntibodiesR44AI136141 · NIAID · INGENIOUS TARGETING LABORATORY, INC. · PI KIRILOV, MILEN · 2022 to 2024
$3.0M
Role of S.aureus in Cutaneous T Cell Lymphoma PathogenesisR01CA271245 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Sergei Borisovich Koralov · 2022 to 2026
$2.7M
Molecular mechanisms of SHP2 signaling dissected with designer binding proteinsR01CA194864 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI KOIDE, SHOHEI · 2016 to 2020
$1.8M
Mechanisms of Prophage-Mediated Virulence Driving Community-Acquired MRSA ContagionK08AI163457 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ULRICH, ROBERT JAMES · 2021 to 2025
$989k
Effects of aging on the T follicular helper response to influenza vaccineK08AI114852 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI HERATI, RAMIN · 2015 to 2019
$947k
Accurate prediction of neutralization capacity from deep mining of SARS-CoV-2 serologyR21AI158997 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI KOIDE, SHOHEI · 2020 to 2020
$466k
NCATS NIH HHS UL1 TR001445NCI NIH HHS P30 CA016087NCI NIH HHS R01 CA194864NCI NIH HHS R01 CA212608NCI NIH HHS R01 CA271245NHLBI NIH HHS R01 HL125816NIAID NIH HHS K08 AI114852NIAID NIH HHS K08 AI163457NIAID NIH HHS R21 AI158997NIAID NIH HHS R44 AI136141NIAID NIH HHS U19 AI082630NIAID NIH HHS UM1 AI148574
6 · The paper itself

Abstract

SARS-CoV-2 infection and vaccination elicit potent immune responses. Our study presents a comprehensive multimodal single-cell analysis of blood from COVID-19 patients and healthy volunteers receiving the SARS-CoV-2 vaccine and booster. We profiled immune responses via transcriptional analysis and lymphocyte repertoire reconstruction. COVID-19 patients displayed an enhanced interferon signature and cytotoxic gene upregulation, absent in vaccine recipients. B and T cell repertoire analysis revealed clonal expansion among effector cells in COVID-19 patients and memory cells in vaccine recipients. Furthermore, while clonal αβ T cell responses were observed in both COVID-19 patients and vaccine recipients, expansion of clonal γδ T cells was found only in infected individuals. Our dataset enables side-by-side comparison of immune responses to infection versus vaccination, including clonal B and T cell responses. Our comparative analysis shows that vaccination induces a robust, durable clonal B and T cell responses, without the severe inflammation associated with infection.

Indexed as

Immune responseImmunologyTranscriptomics

Identifiers

PMID38213787
PMCPMC10783604
OpenAlexW4388979266

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.