Evidence map›Paper›PMID 38212961›Full record

ArticleApplied microbiology and biotechnology2024

Identification of a novel monocyclic carotenoid and prediction of its biosynthetic genes in Algoriphagus sp. oki45.

Naoki Takatani, Takashi Maoka, Tomoo Sawabe, Fumiaki Beppu, Masashi Hosokawa

Open access · goldAbstract read
In one paragraph

Article in Applied microbiology and biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.7field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Marine natural products.Natural product reports · 2026
    Review
  3. Review
  4. Improving plant salt tolerance throughFrontiers in microbiology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Naoki TakataniFaculty of Fisheries Sciences, Hokkaido University, 3-1-1 Minato, Hakodate, Hokkaido, 041-8611, Japan.
Takashi MaokaResearch Institute for Production Development, 15 Shimogamo-Morimoto-Cho, Sakyo-Ku, Kyoto, 606-0805, Japan.
Tomoo SawabeFaculty of Fisheries Sciences, Hokkaido University, 3-1-1 Minato, Hakodate, Hokkaido, 041-8611, Japan.
Fumiaki BeppuFaculty of Fisheries Sciences, Hokkaido University, 3-1-1 Minato, Hakodate, Hokkaido, 041-8611, Japan.
Masashi HosokawaFaculty of Fisheries Sciences, Hokkaido University, 3-1-1 Minato, Hakodate, Hokkaido, 041-8611, Japan. hoso@fish.hokudai.ac.jp.ORCID http://orcid.org/0000-0003-1755-3173
Hokkaido University · JPResearch Institute for Production Development · JP

Funding

JSPS KAKENHI 23658155JSPS KAKENHI 23K14018
6 · The paper itself

Abstract

Bacteria belonging to the genus Algoriphagus have been isolated from various sources, such as Antarctic sea ice, seawater, and sediment, and some strains are known to produce orange to red pigments. However, the pigment composition and biosynthetic genes have not been fully elucidated. A new red-pigmented Algoriphagus sp. strain, oki45, was isolated from the surface of seaweed collected from Senaga-Jima Island, Okinawa, Japan. Genome comparison revealed oki45's average nucleotide identity of less than 95% to its closely related species, Algoriphagus confluentis NBRC 111222

Indexed as

CarotenoidsSeawaterBacteriaBacterial Typing TechniquesDNA, BacterialFatty AcidsMixed Function OxygenasesMultigene FamilyPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNACarotenoidsDNA, BacterialFatty AcidsMixed Function OxygenasesRNA, Ribosomal, 16S2,2ʹ-β-Hydroxylase2-HydroxyflexixanthinAlgoriphagusCarotenoid biosynthetic genesFlexixanthinMonocyclic carotenoids

Identifiers

PMID38212961
PMCPMC10784355
OpenAlexW4390794685

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.