Evidence map›Paper›PMID 38212839›Full record

ArticlePlant methods2024

Cucumber mosaic virus-induced gene and microRNA silencing in water dropwort (Oenanthe javanica (Blume) DC).

Zhen He, Shuangyu Sheng, Lingqi Wang, Tingting Dong, Kun Zhang, Liangjun Li

Open access · goldAbstract read
In one paragraph

Article in Plant methods, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 2 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Zhen HeCollege of Plant Protection, Yangzhou University, Wenhui East Road No.48, Yangzhou, Jiangsu Province, 225009, People's Republic of China.
Shuangyu ShengCollege of Horticulture and Landscape Architecture, Yangzhou University, Yangzhou, People's Republic of China.
Lingqi WangCollege of Horticulture and Landscape Architecture, Yangzhou University, Yangzhou, People's Republic of China.
Tingting DongCollege of Horticulture and Landscape Architecture, Yangzhou University, Yangzhou, People's Republic of China.
Kun ZhangCollege of Plant Protection, Yangzhou University, Wenhui East Road No.48, Yangzhou, Jiangsu Province, 225009, People's Republic of China. zk@yzu.edu.cn.
Liangjun LiCollege of Horticulture and Landscape Architecture, Yangzhou University, Yangzhou, People's Republic of China. ljli@yzu.edu.cn.
Yangzhou University · CN

Funding

the China Agriculture Research System CARS-24the National Natural Science Foundation of China No. 32272485
6 · The paper itself

Abstract

Water dropwort (Oenanthe javanica (Blume) DC), an aquatic perennial plant from the Apiaceae family, rich in dietary fibert, vitamins, and minerals. It usually grows in wet soils and water. Despite accumulating the transcriptomic data, gene function research on water dropwort is still far behind than that of the other crops. The cucumber mosaic virus (CMV) induced gene silencing was established to study the functions of gene and microRNA (miRNA) in the water dropwort. CMV Fast New York strain (CMV-Fny) genomic RNAs 1, 2, and 3 were individually cloned into pCB301 vectors. We deleted part of the ORF 2b region and introduced recognition sites. A CMV-induced gene silencing vector was employed to suppress the expression of endogenous genes, including phytoene desaturase (PDS). In order to assess the efficacy of gene silencing, we also cloned conserved sequence of gibberellin insensitive dwarf (GID1) cDNA sequences into the vector and inoculated the water dropwort. The height of CMV-GID1-infected plants was marginally reduced as a result of GID1 gene silencing, and their leaves were noticeably longer and thinner. Additionally, we also used a CMV-induced silencing vector to analyze the roles of endogenous miRNAs. We used a short tandem target mimic approach to clone miR319 and miR396 from water dropwort into the CMV vector. Plants with CMV-miRNA infection were driven to exhibit the distinctive phenotypes. We anticipate that functional genomic research on water dropwort will be facilitated by the CMV-induced gene silencing technique.

Indexed as

Cucumber mosaic virus (CMV)Gibberellin-insensitive dwarf 1miRNAOenanthe javanicaVirus-induced gene silencing (VIGS)

Identifiers

PMID38212839
PMCPMC10782793
OpenAlexW4390741962

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.