Evidence map›Paper›PMID 38206122›Full record

ArticleeLife2024

A

Caroline M Boyd, Sundharraman Subramanian, Drew T Dunham, Kristin N Parent, Kimberley D Seed

Open access · goldAbstract read
In one paragraph

Article in eLife, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
6.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Phage satellites break into the jumbo era.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
  8. Article
  9. Review
  10. Capsid redirection mechanism of thePhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Article
  11. Lineage-specific defence systems of pandemicPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  12. Genetics, ecology and evolution of phage satellites.Nature reviews. Microbiology · 2025
    Review
  13. Review
  14. Article
  15. AmBio · 2024
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. AbioRxiv : the preprint server for biology · 2024
    Article
4 · The record

Corrections and comments

  • Update of
    A2023
5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Caroline M BoydDepartment of Plant and Microbial Biology, Seed Lab, University of California, Berkeley, Berkeley, United States.ORCID https://orcid.org/0000-0002-3966-9276
Sundharraman SubramanianDepartment of Biochemistry and Molecular Biology, Parent Lab, Michigan State University, East Lansing, United States.
Drew T DunhamDepartment of Plant and Microbial Biology, Seed Lab, University of California, Berkeley, Berkeley, United States.
Kristin N ParentDepartment of Biochemistry and Molecular Biology, Parent Lab, Michigan State University, East Lansing, United States.ORCID https://orcid.org/0000-0002-6095-0628
Kimberley D SeedDepartment of Plant and Microbial Biology, Seed Lab, University of California, Berkeley, Berkeley, United States.ORCID https://orcid.org/0000-0002-0139-1600
University of California, Berkeley · USMichigan State University · US

Funding

Genetic Dissection of Cells and Organisms Training ProgramT32GM132022 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI Nicole King, NOAH K WHITEMAN · 2019 to 2026
$5.2M
Phage resistance and mobile genetic elements in Vibrio choleraeR01AI127652 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI SEED, KIMBERLEY DIANE · 2016 to 2025
$4.6M
Midwest Consortium for High Resolution Cryoelectron MicroscopyU24GM116789 · NIGMS · PURDUE UNIVERSITY · PI BULLITT, ESTHER, DAI, WEI · 2017 to 2021
$3.5M
Bacteriophage interactions with enteric pathogens-the essential role of inner membrane protein YajCR35GM140803 · NIGMS · MICHIGAN STATE UNIVERSITY · PI Kristin N Parent · 2021 to 2026
$2.5M
Sf6 as a model system for understanding the mechanisms of virus: host recognitionR01GM110185 · NIGMS · MICHIGAN STATE UNIVERSITY · PI PARENT, KRISTIN N · 2015 to 2019
$1.4M
LTQ XL Linear Quadrupole Ion Trap Mass SpectrometerS10RR025622 · NCRR · UNIVERSITY OF CALIFORNIA BERKELEY · PI KOHLSTAEDT, LORI · 2009 to 2009
$463k
NCRR NIH HHS S10 RR025622NIAID NIH HHS R01 AI127652NIGMS NIH HHS R01 GM110185NIGMS NIH HHS R35 GM140803NIGMS NIH HHS T32 GM132022NIGMS NIH HHS U24 GM116789NIH HHS GM110185NIH HHS GM116789NIH HHS GM140803NIH HHS T32 GM132022
6 · The paper itself

Abstract

Phage satellites commonly remodel capsids they hijack from the phages they parasitize, but only a few mechanisms regulating the change in capsid size have been reported. Here, we investigated how a satellite from

Indexed as

AcetophenonesBacteriophagesVibrio choleraeCapsidCapsid ProteinsEscherichia coli2,2,2',4'-tetrachloroacetophenoneAcetophenonesCapsid Proteinscapsidinfectious diseasemicrobiologymolecular biophysicsphagesatellitescaffoldstructural biologytransductionVibrio choleraeviruses

Identifiers

PMID38206122
PMCPMC10945586
OpenAlexW4382989366

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.