Evidence map›Paper›PMID 38206049›Full record

ArticlemBio2024

Outer membrane vesicles and the outer membrane protein OmpU govern

Anna Potapova, William Garvey, Peter Dahl, Shuaiqi Guo, Yunjie Chang, Carmen Schwechheimer, Michael A Trebino, Kyle A Floyd, Brett S Phinney, Jun Liu and 2 more

Open access · goldAbstract read
In one paragraph

Article in mBio, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
19.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. A biofilm-derived peptide as an underwater adhesive.bioRxiv : the preprint server for biology · 2026
    Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Crystal structure ofProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  12. Biofilm Associated Persistence and Drug Tolerance in Mycobacteria Within Host Microenvironments.APMIS : acta pathologica, microbiologica, et immunologica Scandinavica · 2026
    Review
  13. Article
  14. Review
  15. Article
  16. Review
  17. Outer membrane vesicles inMicrobial cell (Graz, Austria) · 2026
    Article
  18. Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Anna PotapovaDepartment of Microbiology and Environmental Toxicology, University of California-Santa Cruz, Santa Cruz, California, USA.ORCID 0000-0002-6855-8954
William GarveyDepartment of Microbiology and Environmental Toxicology, University of California-Santa Cruz, Santa Cruz, California, USA.
Peter DahlDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut, USA.
Shuaiqi GuoMicrobial Sciences Institute, Yale University, West Haven, Connecticut, USA.
Yunjie ChangMicrobial Sciences Institute, Yale University, West Haven, Connecticut, USA.
Carmen SchwechheimerDepartment of Microbiology and Environmental Toxicology, University of California-Santa Cruz, Santa Cruz, California, USA.
Michael A TrebinoDepartment of Microbiology and Environmental Toxicology, University of California-Santa Cruz, Santa Cruz, California, USA.
Kyle A FloydDepartment of Microbiology and Environmental Toxicology, University of California-Santa Cruz, Santa Cruz, California, USA.
Brett S PhinneyProteomics Core Facility, UC Davis Genome Center, University of California-Davis, Davis, California, USA.
Jun LiuMicrobial Sciences Institute, Yale University, West Haven, Connecticut, USA.ORCID 0000-0003-3108-6735
Nikhil S MalvankarDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut, USA.
Fitnat H YildizDepartment of Microbiology and Environmental Toxicology, University of California-Santa Cruz, Santa Cruz, California, USA.ORCID 0000-0002-6384-7167
University of California, Santa Cruz · USYale University · USUniversity of California, Davis · US

Funding

Structure-Function Relationships in the Spirochetal Flagellar MotorR01AI087946 · NIAID · YALE UNIVERSITY · PI LIU, JUN · 2010 to 2025
$6.6M
Vibrio cholerae biofilms: structure, function, regulation and role in infectionR01AI114261 · NIAID · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI YILDIZ, HAVVA FITNAT · 2014 to 2024
$5.0M
Functional and Structural Analysis of the Dot/Icm Type IVB Secretion MachineR01AI152421 · NIAID · YALE UNIVERSITY · PI LIU, JUN, ROY, CRAIG R. · 2020 to 2024
$2.9M
Targeting bacterial infections by imaging electrical interactions between host surface pathogensDP2AI138259 · NIAID · YALE UNIVERSITY · PI MALVANKAR, NIKHIL · 2017 to 2017
$2.5M
High-throughput electron cryo-microscopeS10OD023603 · OD · YALE UNIVERSITY · PI SIGWORTH, FREDERICK J · 2018 to 2018
$1.9M
BSLII Stationed Zeiss 880 Confocal Microscope with AiryscanS10OD023528 · OD · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI YILDIZ, HAVVA FITNAT · 2017 to 2017
$456k
NIAID NIH HHS DP2 AI138259NIAID NIH HHS R01 AI087946NIAID NIH HHS R01 AI114261NIAID NIH HHS R01 AI152421NIH HHS S10 OD023528NIH HHS S10 OD023603ODCDC CDC HHS S10 OD023528
6 · The paper itself

Abstract

Biofilms are matrix-encased microbial communities that increase the environmental fitness and infectivity of many human pathogens including

Indexed as

Vibrio choleraeBacterial ProteinsBiofilmsDNAExtracellular Polymeric Substance MatrixHumansMembrane ProteinsPolysaccharidesProteomicsBacterial ProteinsDNAMembrane ProteinsPolysaccharidesbiofilm matrixbiofilmsouter membrane proteinsVibrio cholerae

Identifiers

PMID38206049
PMCPMC10865864
OpenAlexW4390740103

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.