Evidence map›Paper›PMID 38203801›Full record

ArticleInternational journal of molecular sciences2024

QTL Detection and Candidate Gene Identification for Eating and Cooking Quality Traits in Rice (

Jianhua Jiang, Shaojie Song, Changmin Hu, Chunyu Jing, Qing Xu, Xinru Li, Mengyuan Zhang, Mei Hai, Jiaming Shen, Ying Zhang and 2 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
5.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Jianhua JiangAnhui Province Key Laboratory of Rice Genetics and Breeding (Rice Research Institute), Anhui Academy of Agricultural Sciences, Hefei 230031, China.
Shaojie SongAnhui Province Key Laboratory of Rice Genetics and Breeding (Rice Research Institute), Anhui Academy of Agricultural Sciences, Hefei 230031, China.
Changmin HuAnhui Province Key Laboratory of Rice Genetics and Breeding (Rice Research Institute), Anhui Academy of Agricultural Sciences, Hefei 230031, China.
Chunyu JingAnhui Province Key Laboratory of Rice Genetics and Breeding (Rice Research Institute), Anhui Academy of Agricultural Sciences, Hefei 230031, China.
Qing XuAnhui Province Key Laboratory of Rice Genetics and Breeding (Rice Research Institute), Anhui Academy of Agricultural Sciences, Hefei 230031, China.
Xinru LiAnhui Province Key Laboratory of Rice Genetics and Breeding (Rice Research Institute), Anhui Academy of Agricultural Sciences, Hefei 230031, China.
Mengyuan ZhangAnhui Province Key Laboratory of Rice Genetics and Breeding (Rice Research Institute), Anhui Academy of Agricultural Sciences, Hefei 230031, China.
Mei HaiAnhui Province Key Laboratory of Rice Genetics and Breeding (Rice Research Institute), Anhui Academy of Agricultural Sciences, Hefei 230031, China.
Jiaming ShenAnhui Province Key Laboratory of Rice Genetics and Breeding (Rice Research Institute), Anhui Academy of Agricultural Sciences, Hefei 230031, China.
Ying ZhangAnhui Province Key Laboratory of Rice Genetics and Breeding (Rice Research Institute), Anhui Academy of Agricultural Sciences, Hefei 230031, China.
Dezheng WangAnhui Province Key Laboratory of Rice Genetics and Breeding (Rice Research Institute), Anhui Academy of Agricultural Sciences, Hefei 230031, China.
Xiaojing DangAnhui Province Key Laboratory of Rice Genetics and Breeding (Rice Research Institute), Anhui Academy of Agricultural Sciences, Hefei 230031, China.
Anhui Academy of Agricultural Sciences · CNRice Research Institute · CNAnhui Agricultural University · CN

Funding

Major Science and Technology Program of Anhui province, China 2021d06050002Natural Science Foundation of Anhui Province 2108085MC100Program of Rice Genetic Breeding Key Laboratory of Anhui province and the Program of Rice Molecular Breeding International Joint Research Center SDKF-2022-01Program of Rice Genetic Breeding Key Laboratory of Anhui province and the Program of Rice Molecular Breeding International Joint Research Center SDKF-2023-01the Talent Program of Anhui Academy of Agricultural Sciences QNYC-201903the Talent Program of Anhui Academy of Agricultural Sciences QNYC-202103
6 · The paper itself

Abstract

The eating and cooking quality (ECQ) directly affects the taste of rice, being closely related to factors such as gelatinization temperature (GT), gel consistency (GC) and amylose content (AC). Mining the quantitative trait loci (QTLs), and gene loci controlling ECQ-related traits is vital. A genome-wide association study on ECQ-related traits was conducted, combining 1.2 million single nucleotide polymorphisms (SNPs) with the phenotypic data of 173 rice accessions. Two QTLs for GT, one for GC and five for AC were identified, of which two were found in previously reported genes, and six were newly found. There were 28 positional candidate genes in the region of

Indexed as

OryzaQuantitative Trait LociAmyloseCookingGenome-Wide Association StudyAmylosecandidate geneseating and cooking qualitygene expressiongenome-wide association studyquantitative trait locisingle nucleotide polymorphism

Identifiers

PMID38203801
PMCPMC10779416
OpenAlexW4390538789

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.