Evidence map›Paper›PMID 38203518›Full record

ArticleInternational journal of molecular sciences2023

Comprehensive Analysis of PANoptosis-Related Gene Signature of Ulcerative Colitis.

Jun-Meng Wang, Jiao Yang, Wan-Yu Xia, Yue-Mei Wang, Yuan-Bing Zhu, Qin Huang, Tong Feng, Lu-Shuang Xie, Si-Hui Li, Shu-Qing Liu and 2 more

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  10. PANoptosis: potential new targets and therapeutic prospects in digestive diseases.Apoptosis : an international journal on programmed cell death · 2025
    Review
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  14. PANoptosis: a potential target of atherosclerotic cardiovascular disease.Apoptosis : an international journal on programmed cell death · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Jun-Meng WangAcupuncture and Moxibustion School, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.
Jiao YangAcupuncture and Moxibustion School, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.
Wan-Yu XiaAcupuncture and Moxibustion School, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.
Yue-Mei WangAcupuncture and Moxibustion School, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.
Yuan-Bing ZhuAcupuncture and Moxibustion School, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.
Qin HuangAcupuncture and Moxibustion School, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.
Tong FengAcupuncture and Moxibustion School, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.
Lu-Shuang XieSchool of Basic Medicine, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.
Si-Hui LiAcupuncture and Moxibustion School, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.
Shu-Qing LiuAcupuncture and Moxibustion School, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.
Shu-Guang YuAcupuncture and Moxibustion School, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.
Qiao-Feng WuAcupuncture and Moxibustion School, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.

Funding

China Postdoctoral Science Foundation 2022MD723717Foundation of Sichuan Youth Science and Technology 2023NSFSC1817National Natural Science Foundation of China 82174512National Natural Science Foundation of China 82230127National Natural Science Foundation of China 82305412
6 · The paper itself

Abstract

Accumulating evidence shows that the abnormal increase in the mortality of intestinal epithelial cells (IECs) caused by apoptosis, pyroptosis, and necroptosis is closely related to the function of mucous membrane immunity and barrier function in patients with ulcerative colitis (UC). As a procedural death path that integrates the above-mentioned many deaths, the role of PANoptosis in UC has not been clarified. This study aims to explore the characterization of PANoptosis patterns and determine the potential biomarkers and therapeutic targets. We constructed a PANoptosis gene set and revealed significant activation of PANoptosis in UC patients based on multiple transcriptome profiles of intestinal mucosal biopsies from the GEO database. Comprehensive bioinformatics analysis revealed five key genes (ZBP1, AIM2, CASP1/8, IRF1) of PANoptosome with good diagnostic value and were highly correlated with an increase in pro-inflammatory immune cells and factors. In addition, we established a reliable ceRNA regulatory network of PANoptosis and predicted three potential small-molecule drugs sharing calcium channel blockers that were identified, among which flunarizine exhibited the highest correlation with a high binding affinity to the targets. Finally, we used the DSS-induced colitis model to validate our findings. This study identifies key genes of PANoptosis associated with UC development and hypothesizes that IRF1 as a TF promotes PANoptosome multicomponent expression, activates PANoptosis, and then induces IECs excessive death.

Indexed as

ColitisColitis, UlcerativeApoptosisBiopsyCalcium Channel BlockersHumansCalcium Channel BlockersceRNA networkcolitisgene signaturesintegrated analysisPANoptosis

Identifiers

PMID38203518
PMCPMC10779047

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.