Evidence map›Paper›PMID 38203325›Full record

ReviewInternational journal of molecular sciences2023

Genetic Alterations of NF-κB and Its Regulators: A Rich Platform to Advance Colorectal Cancer Diagnosis and Treatment.

Faranak Alipourgivi, Aishat Motolani, Alice Y Qiu, Wenan Qiang, Guang-Yu Yang, Shuibing Chen, Tao Lu

Open access · goldAbstract readReview
In one paragraph

Review in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Anticancer Activity of Roburic Acid: In Vitro and In Silico Investigation.International journal of molecular sciences · 2025
    Article
  6. Review
  7. Review
  8. Review
  9. Closing Editorial: Colorectal Cancer-A Molecular Genetics Perspective.International journal of molecular sciences · 2024
    Article
  10. Article
  11. Study on the effect and mechanism ofFrontiers in microbiology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Faranak AlipourgiviDepartment of Pharmacology & Toxicology, Indiana University School of Medicine, Indianapolis, IN 46202, USA.ORCID 0000-0003-2583-8953
Aishat MotolaniDepartment of Pharmacology & Toxicology, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Alice Y QiuCenter for Developmental Therapeutics, Chemistry of Life Processes Institute, Northwestern University, Evanston, IL 60208, USA.
Wenan QiangCenter for Developmental Therapeutics, Chemistry of Life Processes Institute, Northwestern University, Evanston, IL 60208, USA.ORCID 0000-0001-5068-7128
Guang-Yu YangRobert H. Lurie Comprehensive Cancer Center of Northwestern University, Chicago, IL 60611, USA.
Shuibing ChenDepartment of Surgery, Weill Cornell Medicine, 1300 York Avenue, New York, NY 10065, USA.
Tao LuDepartment of Pharmacology & Toxicology, Indiana University School of Medicine, Indianapolis, IN 46202, USA.ORCID 0000-0002-0013-4987
Northwestern University · USIndiana University Health · USCornell University · USIndiana University School of Medicine

Funding

Gene-specific responses to NF-kB through lysine and arginine methylation of p65R01GM120156 · NIGMS · INDIANA UNIVERSITY INDIANAPOLIS · PI LU, TAO · 2017 to 2021
$1.5M
Impact of NF-kB methylation on chemoresistance and metastasis of breast cancerR03CA223906 · NCI · INDIANA UNIVERSITY INDIANAPOLIS · PI LU, TAO, NAKSHATRI, HARIKRISHNA · 2018 to 2019
$157k
NCI NIH HHS R03 CA223906NIGMS NIH HHS R01 GM120156NIH HHS 1R01GM120156-01A1 to TL
6 · The paper itself

Abstract

Colorectal cancer (CRC) is the third leading cause of cancer mortality in the United States, with an estimated 52,000 deaths in 2023. Though significant progress has been made in both diagnosis and treatment of CRC in recent years, genetic heterogeneity of CRC-the culprit for possible CRC relapse and drug resistance, is still an insurmountable challenge. Thus, developing more effective therapeutics to overcome this challenge in new CRC treatment strategies is imperative. Genetic and epigenetic changes are well recognized to be responsible for the stepwise development of CRC malignancy. In this review, we focus on detailed genetic alteration information about the nuclear factor (NF)-κB signaling, including both NF-κB family members, and their regulators, such as protein arginine methyltransferase 5 (PRMT5), and outer dynein arm docking complex subunit 2 (ODAD2, also named armadillo repeat-containing 4, ARMC4), etc., in CRC patients. Moreover, we provide deep insight into different CRC research models, with a particular focus on patient-derived xenografts (PDX) and organoid models, and their potential applications in CRC research. Genetic alterations on NF-κB signaling components are estimated to be more than 50% of the overall genetic changes identified in CRC patients collected by cBioportal for Cancer Genomics; thus, emphasizing its paramount importance in CRC progression. Consequently, various genetic alterations on NF-κB signaling may hold great promise for novel therapeutic development in CRC. Future endeavors may focus on utilizing CRC models (e.g., PDX or organoids, or isogenic human embryonic stem cell (hESC)-derived colonic cells, or human pluripotent stem cells (hPSC)-derived colonic organoids, etc.) to further uncover the underpinning mechanism of these genetic alterations in NF-κB signaling in CRC progression. Moreover, establishing platforms for drug discovery in dishes, and developing Biobanks, etc., may further pave the way for the development of innovative personalized medicine to treat CRC in the future.

Indexed as

Colorectal NeoplasmsNF-kappa BAnimalsAxonemeDisease Models, AnimalHumansPrecision MedicineProtein-Arginine N-MethyltransferasesSignal TransductionNF-kappa BPRMT5 protein, humanProtein-Arginine N-MethyltransferasesCRCgenetic alterationNF-κBODAD2organoidPDXPRMT5

Identifiers

PMID38203325
PMCPMC10779007
OpenAlexW4390061551

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.