Evidence map›Paper›PMID 38203196›Full record

ArticleInternational journal of molecular sciences2023

A Functional Single Nucleotide Polymorphism in the 3' Untranslated Region of the Porcine JARID2 Gene Is Associated with Aggressive Behavior of Weaned Pigs after Mixing.

Huan Yang, Chunlei Zhang, Xiaohuan Chao, Jing Zhao, Mingzheng Liu, Jiahao Chen, Shuhan Liu, Tianshuo Wang, Asim Muhammad, Allan P Schinckel and 1 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Huan YangCollege of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, China.
Chunlei ZhangCollege of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, China.
Xiaohuan ChaoCollege of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, China.
Jing ZhaoCollege of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, China.
Mingzheng LiuCollege of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, China.
Jiahao ChenCollege of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, China.
Shuhan LiuCollege of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, China.
Tianshuo WangCollege of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, China.
Asim MuhammadCollege of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, China.
Allan P SchinckelDepartment of Animal Sciences, Purdue University, West Lafayette, IN 47907, USA.ORCID 0000-0002-8614-7198
Bo ZhouCollege of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, China.ORCID 0000-0003-2857-8536
Nanjing Agricultural University · CNPurdue University West Lafayette · US

Funding

JBGS Project of Breeding Industry Revitalization in Jiangsu Province JBGS(2021)101National Natural Science Foundation of China 32172786
6 · The paper itself

Abstract

In pig production, pigs often show more aggressive behavior after mixing, which adversely affects animal welfare and growth performance. The Jumonji and structural domain-rich AT interaction domain 2 (JARID2) gene plays an important role in neurodevelopment in mice and various psychiatric disorders in humans. The JARID2 gene may impact the aggressive behavior of pigs. By observing the behavior of 500 weaned pigs during the first 72 h after mixing, the ear tissue samples of the 12 most aggressive and 12 least aggressive pigs were selected for DNA resequencing based on the intensity of their aggressive behavior. Large group correlation analysis indicated that the rs3262221458 site located in the 3'-UTR region of the porcine JARID2 gene has a strong relationship with the aggressive behavior of weaned pigs. Pigs with the mutant TT genotype of rs3262221458 have more aggressive behavior than those pigs with the GG and GT genotypes. The dual luciferase assay indicated that the luciferase activity of the plasmids containing the G allele of rs326221458 was significantly less than that of plasmids containing the T allele of rs326221458 and control groups. The binding ability of miR-9828-3p to sequences containing the T allele was less than that of sequences containing the G allele. The overexpression of miR-9828-3p in porcine neuroglial cells (PNGCs) and PK15 cells significantly decreased the mRNA and protein levels of the JARID2 gene. In addition, miR-9828-3p inhibited the proliferation of PNGCs. After inhibiting miR-9828-3p, the mRNA and protein expression levels of JARID2 increased, and the proliferation of PNGCs showed an opposite trend to the cells that forced the expression of miR-9828-3p. In addition, interference with the JARID2 gene by siRNA can effectively inhibit the proliferation of PNGCs. In summary, we found that the rs326221458 locus regulates the expression of the JARID2 gene by affecting the binding of miR-9828-3p and the JARID2 gene, thereby affecting the aggressive behavior of weaned pigs after mixing.

Indexed as

MicroRNAsPolymorphism, Single Nucleotide3' Untranslated RegionsAnimalsHumansLuciferasesMicePolycomb Repressive Complex 2RNA, MessengerSwine3' Untranslated RegionsJARID2 protein, humanLuciferasesMicroRNAsPolycomb Repressive Complex 2RNA, Messengeraggressive behaviorJARID2miR-9828-3ppigSNP

Identifiers

PMID38203196
PMCPMC10779117
OpenAlexW4389938200

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.