Evidence map›Paper›PMID 38202411›Full record

ArticlePlants (Basel, Switzerland)2023

The Sink-Source Relationship in Cucumber (

Yudan Wang, Huimin Zhang, Jiawen Gu, Chen Chen, Jiexia Liu, Zhiping Zhang, Bing Hua, Minmin Miao

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
2.0field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 5 citations in OpenAlex.

  1. Genetic tapestry of Capsicum fruit colors: a comparative analysis of four cultivated species.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Yudan WangCollege of Horticulture and Landscape Architecture, Yangzhou University, Yangzhou 225009, China.
Huimin ZhangJiangsu Yanjiang Institute of Agricultural Sciences, Nantong 226541, China.
Jiawen GuCollege of Horticulture and Landscape Architecture, Yangzhou University, Yangzhou 225009, China.
Chen ChenCollege of Horticulture and Landscape Architecture, Yangzhou University, Yangzhou 225009, China.
Jiexia LiuCollege of Horticulture and Landscape Architecture, Yangzhou University, Yangzhou 225009, China.
Zhiping ZhangCollege of Horticulture and Landscape Architecture, Yangzhou University, Yangzhou 225009, China.ORCID 0000-0002-6433-1074
Bing HuaCollege of Horticulture and Landscape Architecture, Yangzhou University, Yangzhou 225009, China.
Minmin MiaoCollege of Horticulture and Landscape Architecture, Yangzhou University, Yangzhou 225009, China.ORCID 0000-0002-7119-4442
Yangzhou University · CN

Funding

the R&D Foundation of Jiangsu Province, China BE2022425
6 · The paper itself

Abstract

The optimization of the sink-source relationship is of great importance for crop yield regulation. Cucumber is a typical raffinose family oligosaccharide (RFO)-transporting crop. DNA methylation is a common epigenetic modification in plants, but its role in sink-source regulation has not been demonstrated in RFO-translocating species. Here, whole-genome bisulfite sequencing (WGBS-seq) was conducted to compare the nonfruiting-node leaves (NFNLs) and leaves of fruit setting (FNLs) at the 12th node by removing all female flowers in other nodes of the two treatments. We found considerable differentially methylated genes enriched in photosynthesis and carbohydrate metabolic processes. Comparative transcriptome analysis between FNLs and NFNLs indicated that many differentially expressed genes (DEGs) with differentially methylated regions were involved in auxin, ethylene and brassinolide metabolism; sucrose metabolism; and RFO synthesis pathways related to sink-source regulation. Moreover, DNA methylation levels of six sink-source-related genes in the pathways mentioned above decreased in leaves after 5-aza-dC-2'-deoxycytidine (5-Aza-dC, a DNA methyltransferase inhibitor) treatment on FNLs, and stachyose synthase (

Indexed as

5-aza-dC-2′-deoxycytidinecucumberDNA methylationraffinose family oligosaccharidessink-source regulation

Identifiers

PMID38202411
PMCPMC10780960
OpenAlexW4390348050

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.