Evidence map›Paper›PMID 38201289›Full record

ArticleCells2023

Transcriptional Control of Subcutaneous Adipose Tissue by the Transcription Factor CTCF Modulates Heterogeneity in Fat Distribution in Women.

Edina Erdos, Katalin Sandor, Crystal L Young-Erdos, Laszlo Halasz, Steven R Smith, Timothy F Osborne, Adeline Divoux

Open access · goldAbstract read
In one paragraph

Article in Cells, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.0field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Edina ErdosDivision of Diabetes Endocrinology and Metabolism, Departments of Medicine, Biological Chemistry and Pediatrics, Johns Hopkins University School of Medicine, Institute for Fundamental Biomedical Research, Johns Hopkins All Children's Hospital, St. Petersburg, FL 33701, USA.ORCID 0000-0001-7223-0946
Katalin SandorDivision of Diabetes Endocrinology and Metabolism, Departments of Medicine, Biological Chemistry and Pediatrics, Johns Hopkins University School of Medicine, Institute for Fundamental Biomedical Research, Johns Hopkins All Children's Hospital, St. Petersburg, FL 33701, USA.
Crystal L Young-ErdosDepartment of Chemistry & Biochemistry, Eckerd College, St. Petersburg, FL 33711, USA.
Laszlo HalaszDivision of Diabetes Endocrinology and Metabolism, Departments of Medicine, Biological Chemistry and Pediatrics, Johns Hopkins University School of Medicine, Institute for Fundamental Biomedical Research, Johns Hopkins All Children's Hospital, St. Petersburg, FL 33701, USA.ORCID 0000-0003-4726-7012
Steven R SmithTranslational Research Institute, Adventhealth, Orlando, FL 32804, USA.ORCID 0000-0002-5098-8147
Timothy F OsborneDivision of Diabetes Endocrinology and Metabolism, Departments of Medicine, Biological Chemistry and Pediatrics, Johns Hopkins University School of Medicine, Institute for Fundamental Biomedical Research, Johns Hopkins All Children's Hospital, St. Petersburg, FL 33701, USA.ORCID 0000-0002-5150-4300
Adeline DivouxTranslational Research Institute, Adventhealth, Orlando, FL 32804, USA.
Johns Hopkins University · USTranslational Research Institute for Metabolism and Diabetes · USEckerd College · US

Funding

Epigenetic regulation of adipose tissue distribution in womenR01DK107009 · NIDDK · ADVENTHEALTH ORLANDO · PI OSBORNE, TIMOTHY F, SMITH, STEVEN RICHARD · 2016 to 2019
$2.4M
NIDDK NIH HHS R01 DK107009NIH HHS R01DK123456
6 · The paper itself

Abstract

Determining the mechanism driving body fat distribution will provide insights into obesity-related health risks. We used functional genomics tools to profile the epigenomic landscape to help infer the differential transcriptional potential of apple- and pear-shaped women's subcutaneous adipose-derived stem cells (ADSCs). We found that CCCTC-binding factor (CTCF) expression and its chromatin binding were increased in ADSCs from pear donors compared to those from apple donors. Interestingly, the pear enriched CTCF binding sites were located predominantly at the active transcription start sites (TSSs) of genes with active histone marks and YY1 motifs and were also associated with pear enriched RNAPII binding. In contrast, apple enriched CTCF binding sites were mainly found at intergenic regions and when identified at TSS, they were enriched with the bivalent chromatin signatures. Altogether, we provide evidence that CTCF plays an important role in differential regulation of subcutaneous ADSCs gene expression and may influence the development of apple vs. pear body shape.

Indexed as

Gene Expression RegulationTranscription FactorsCCCTC-Binding FactorChromatinFemaleHumansSubcutaneous FatCCCTC-Binding FactorChromatinCTCF protein, humanTranscription Factorsadipose-derived stem cellsbivalent chromatinCTCFepigeneticfat distributionMETRNLRNAPII

Identifiers

PMID38201289
PMCPMC10778492
OpenAlexW4390467154

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.