Evidence map›Paper›PMID 38200218›Full record

ArticlePlant cell reports2024

LsMybW-encoding R2R3-MYB transcription factor is responsible for a shift from black to white in lettuce seed.

Kousuke Seki, Kenji Komatsu, Kanami Yamaguchi, Yoshinori Murai, Keiji Nishida, Ryohei Koyama, Yuichi Uno

Open access · hybridAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Plant cell reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Kousuke Seki *Nagano Vegetable and Ornamental Crops Experiment Station, Tokoo 1066-1, Souga, Shiojiri, Nagano, 399-6461, Japan.ORCID http://orcid.org/0000-0002-5420-838X
Kenji Komatsu *Department of Bioresource Development, Tokyo University of Agriculture, Funako 1737, Atsugi, Kanagawa, 243-0034, Japan.ORCID http://orcid.org/0000-0003-3043-3766
Kanami YamaguchiFaculty of Agriculture, Kobe University, 1-1, Rokkodai, Nada, Kobe, Hyogo, 657-8501, Japan.
Yoshinori MuraiDepartment of Botany, National Museum of Nature and Science, Amakubo 4-1-1, Tsukuba, Ibaraki, 305-0005, Japan.ORCID http://orcid.org/0000-0001-7986-4781
Keiji NishidaGraduate School of Science, Technology and Innovation, Kobe University, 1-1, Rokkodai, Nada, Kobe, Hyogo, 657-8501, Japan.
Ryohei KoyamaFaculty of Agriculture, Kobe University, 1-1, Rokkodai, Nada, Kobe, Hyogo, 657-8501, Japan.
Yuichi UnoFaculty of Agriculture, Kobe University, 1-1, Rokkodai, Nada, Kobe, Hyogo, 657-8501, Japan. yuno@kobe-u.ac.jp.ORCID http://orcid.org/0000-0002-1831-5161
Kobe University · JPKAN Research Institute · JPNagano Prefecture Forestry Research Center · JPNational Museum of Nature and Science · JPTokyo University of Agriculture · JP

Funding

Ministry of Agriculture, Forestry and Fisheries Project for Climate ChangeMinistry of Agriculture, Forestry and Fisheries Vegetable-4103
6 · The paper itself

Abstract

key messageWe identified LsMybW as the allele responsible for the shift in color from black to white seeds in wild ancestors of lettuce to modern cultivars. Successfully selected white seeds are a key agronomic trait for lettuce cultivation and breeding; however, the mechanism underlying the shift from black-in its wild ancestor-to white seeds remains uncertain. We aimed to identify the gene/s responsible for white seed trait in lettuce. White seeds accumulated less proanthocyanidins than black seeds, similar to the phenotype observed in Arabidopsis TT2 mutants. Genetic mapping of a candidate gene was performed with double-digest RAD sequencing using an F

Indexed as

ArabidopsisTranscription FactorsLactucaPlant BreedingSeedsTranscription FactorsGenome editingLettuceR2R3-MYB transcription factorRAD-seqWhite seed

Identifiers

PMID38200218
PMCPMC10781863
OpenAlexW4390719576

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.