Evidence map›Paper›PMID 38199323›Full record

ArticleChest2024

Measuring Implicit Bias in ICU Notes Using Word-Embedding Neural Network Models.

Julien Cobert, Hunter Mills, Albert Lee, Oksana Gologorskaya, Edie Espejo, Sun Young Jeon, W John Boscardin, Timothy A Heintz, Christopher J Kennedy, Deepshikha C Ashana and 4 more

Open access · greenAbstract read
In one paragraph

Article in Chest, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

Julien CobertAnesthesia Service, San Francisco VA Health Care System, University of California, San Francisco, San Francisco, CA; Department of Anesthesia and Perioperative Care, University of California, San Francisco, San Francisco, CA. Electronic address: Julien.cobert@ucsf.edu.
Hunter MillsBakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA.
Albert LeeBakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA.
Oksana GologorskayaBakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA.
Edie EspejoDivision of Geriatrics, University of California, San Francisco, San Francisco, CA.
Sun Young JeonDivision of Geriatrics, University of California, San Francisco, San Francisco, CA.
W John BoscardinDivision of Geriatrics, University of California, San Francisco, San Francisco, CA.
Timothy A HeintzSchool of Medicine, University of California, San Diego, San Diego, CA.
Christopher J KennedyDepartment of Psychiatry, Harvard Medical School, Boston, MA; Center for Precision Psychiatry, Massachusetts General Hospital, Boston, MA.
Deepshikha C AshanaDivision of Pulmonary, Allergy, and Critical Care Medicine, Duke University, Durham, NC.
Allyson Cook ChapmanDepartment of Medicine, the Division of Critical Care and Palliative Medicine, University of California, San Francisco, San Francisco, CA; Department of Surgery, University of California, San Francisco, San Francisco, CA.
Karthik RaghunathanDepartment of Anesthesia and Perioperative Care, Duke University, Durham, NC.
Alex K SmithDepartment of Geriatrics, Palliative, and Extended Care, Veterans Affairs Medical Center, University of California, San Francisco, San Francisco, CA; Division of Geriatrics, University of California, San Francisco, San Francisco, CA.
Sei J LeeDivision of Geriatrics, University of California, San Francisco, San Francisco, CA.
University of California, San Francisco · USDuke University · USHarvard University · USSan Francisco VA Medical Center · USUniversity of California San Diego · US

Funding

VARC CoreP30AG044281 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Louise C. Walter · 2013 to 2026
$19.9M
Prognostic calculators for patients with Alzheimers disease and related dementiasR01AG057751 · NIA · NORTHERN CALIFORNIA INSTITUTE/RES/EDU · PI LEE, SEI, SMITH, ALEXANDER KELIIMOEANU · 2018 to 2021
$1.5M
Mentoring Researchers in Prognosis Research in Alzheimer’s Disease and Related DementiasK24AG068312 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Alexander Keliimoeanu Smith · 2020 to 2026
$1.2M
Mentoring Patient-Oriented Research to Individualize Care for Hospitalized Older Adults with and without Alzheimer's Disease and Related DementiasK24AG066998 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Sei Lee · 2021 to 2026
$1.1M
NIA NIH HHS K24 AG066998NIA NIH HHS K24 AG068312NIA NIH HHS P30 AG044281NIA NIH HHS R01 AG057751
6 · The paper itself

Abstract

backgroundLanguage in nonmedical data sets is known to transmit human-like biases when used in natural language processing (NLP) algorithms that can reinforce disparities. It is unclear if NLP algorithms of medical notes could lead to similar transmissions of biases. RESEARCH QUESTION: Can we identify implicit bias in clinical notes, and are biases stable across time and geography? STUDY DESIGN AND

methodsTo determine whether different racial and ethnic descriptors are similar contextually to stigmatizing language in ICU notes and whether these relationships are stable across time and geography, we identified notes on critically ill adults admitted to the University of California, San Francisco (UCSF), from 2012 through 2022 and to Beth Israel Deaconess Hospital (BIDMC) from 2001 through 2012. Because word meaning is derived largely from context, we trained unsupervised word-embedding algorithms to measure the similarity (cosine similarity) quantitatively of the context between a racial or ethnic descriptor (eg, African-American) and a stigmatizing target word (eg, nonco-operative) or group of words (violence, passivity, noncompliance, nonadherence).

resultsIn UCSF notes, Black descriptors were less likely to be similar contextually to violent words compared with White descriptors. Contrastingly, in BIDMC notes, Black descriptors were more likely to be similar contextually to violent words compared with White descriptors. The UCSF data set also showed that Black descriptors were more similar contextually to passivity and noncompliance words compared with Latinx descriptors.

interpretationImplicit bias is identifiable in ICU notes. Racial and ethnic group descriptors carry different contextual relationships to stigmatizing words, depending on when and where notes were written. Because NLP models seem able to transmit implicit bias from training data, use of NLP algorithms in clinical prediction could reinforce disparities. Active debiasing strategies may be necessary to achieve algorithmic fairness when using language models in clinical research.

Indexed as

Intensive Care UnitsNatural Language ProcessingNeural Networks, ComputerAlgorithmsBiasCritical IllnessElectronic Health RecordsFemaleHumansMalecritical careinequitylinguisticsmachine learningnatural language processing

Identifiers

PMID38199323
PMCPMC11317817
OpenAlexW4390659831

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.