Evidence map›Paper›PMID 38198524›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

BRCA1 and ELK-1 regulate neural progenitor cell fate in the optic tectum in response to visual experience in

Lin-Chien Huang, Caroline R McKeown, Hai-Yan He, Aaron C Ta, Hollis T Cline

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Assessing circuit function in the developingFrontiers in behavioral neuroscience · 2026
    Review
  3. Review
  4. ELK1 regulates BMPR1B transcriptional activity in ovine granulosa cells.Frontiers in cell and developmental biology · 2025
    Article
  5. BRCA1 and ELK-1 regulate neural progenitor cell fate in the optic tectum in response to visual experience inProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Activity-Induced Cortical Glutamatergic Neuron Nascent Proteins.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Lin-Chien Huang *Department of Neuroscience, Dorris Neuroscience Center, Scripps Research Institute, La Jolla, CA 92037.
Caroline R McKeown *Department of Neuroscience, Dorris Neuroscience Center, Scripps Research Institute, La Jolla, CA 92037.
Hai-Yan HeDepartment of Neuroscience, Dorris Neuroscience Center, Scripps Research Institute, La Jolla, CA 92037.ORCID 0000-0002-6692-6012
Aaron C TaDepartment of Neuroscience, Dorris Neuroscience Center, Scripps Research Institute, La Jolla, CA 92037.
Hollis T ClineDepartment of Neuroscience, Dorris Neuroscience Center, Scripps Research Institute, La Jolla, CA 92037.ORCID 0000-0002-4887-9603
Scripps Research Institute · US

Funding

Activity-dependent Development of Visual System DevelopmentR01EY011261 · NEI · SCRIPPS RESEARCH INSTITUTE, THE · PI CLINE, HOLLIS T. · 1996 to 2018
$11.1M
Experience-dependent Cellular Plasticity MechanismsR01EY031597 · NEI · SCRIPPS RESEARCH INSTITUTE, THE · PI CLINE, HOLLIS T. · 2021 to 2025
$3.6M
Development of midbrain circuitryR01EY027437 · NEI · SCRIPPS RESEARCH INSTITUTE, THE · PI CLINE, HOLLIS T. · 2018 to 2020
$1.9M
Transcriptome Analysis of Identified Cells in Developing Xenopus laevis CNSR01NS076006 · NINDS · SCRIPPS RESEARCH INSTITUTE, THE · PI CLINE, HOLLIS T. · 2011 to 2013
$1.4M
In vivo functional analysis of a neuronal membrane-specific proteasome complexR21NS114975 · NINDS · SCRIPPS RESEARCH INSTITUTE, THE · PI CLINE, HOLLIS T. · 2020 to 2020
$532k
NEI NIH HHS R01 EY011261NEI NIH HHS R01 EY027437NEI NIH HHS R01 EY031597NINDS NIH HHS R01 NS076006NINDS NIH HHS R21 NS114975
6 · The paper itself

Abstract

In developing Xenopus tadpoles, the optic tectum begins to receive patterned visual input while visuomotor circuits are still undergoing neurogenesis and circuit assembly. This visual input regulates neural progenitor cell fate decisions such that maintaining tadpoles in the dark increases proliferation, expanding the progenitor pool, while visual stimulation promotes neuronal differentiation. To identify regulators of activity-dependent neural progenitor cell fate, we profiled the transcriptomes of proliferating neural progenitor cells and newly differentiated neurons using RNA-Seq. We used advanced bioinformatic analysis of 1,130 differentially expressed transcripts to identify six differentially regulated transcriptional regulators, including Breast Cancer 1 (BRCA1) and the ETS-family transcription factor, ELK-1, which are predicted to regulate the majority of the other differentially expressed transcripts. BRCA1 is known for its role in cancers, but relatively little is known about its potential role in regulating neural progenitor cell fate. ELK-1 is a multifunctional transcription factor which regulates immediate early gene expression. We investigated the potential functions of BRCA1 and ELK-1 in activity-regulated neurogenesis in the tadpole visual system using in vivo time-lapse imaging to monitor the fate of GFP-expressing SOX2+ neural progenitor cells in the optic tectum. Our longitudinal in vivo imaging analysis showed that knockdown of either BRCA1 or ELK-1 altered the fates of neural progenitor cells and furthermore that the effects of visual experience on neurogenesis depend on BRCA1 and ELK-1 expression. These studies provide insight into the potential mechanisms by which neural activity affects neural progenitor cell fate.

Indexed as

Neural Stem CellsSuperior ColliculiAnimalsBRCA1 Proteinets-Domain Protein Elk-1Genes, BRCA1NeuronsProto-Oncogene Proteins c-etsXenopus laevisBRCA1 Proteinets-Domain Protein Elk-1Proto-Oncogene Proteins c-etsBRCA1differential expressionneural progenitor celltranscriptionXenopus

Identifiers

PMID38198524
PMCPMC10801852
OpenAlexW4390691759

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.