Evidence map›Paper›PMID 38197898›Full record

ArticleImmunogenetics2024

Costimulatory receptors in the channel catfish: CD28 family members and their ligands.

Sylvie M A Quiniou, Eva Bengtén, Pierre Boudinot

Abstract read
PubMed Publisher
In one paragraph

Article in Immunogenetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Sylvie M A QuiniouUSDA-ARS-WARU, 141 Experiment Station Rd, 38776, Stoneville, MS, USA. sylvie.quiniou@usda.gov.
Eva BengténCenter for Immunology and Microbial Research, University of Mississippi Medical Center, 39216, Jackson, MS, USA.
Pierre BoudinotUniversité Paris-Saclay, INRAE, UVSQ, VIM, Jouy-en-Josas, 78350, France. pierre.boudinot@inrae.fr.
Agricultural Research Service · USUniversité de Versailles Saint-Quentin-en-Yvelines · FRUniversity of Mississippi Medical Center · US

Funding

Agence Nationale de la Recherche ANR-21-CE35-0019Agricultural Research Service 6066-31000-016-00D
6 · The paper itself

Abstract

The CD28-B7 interaction is required to deliver a second signal necessary for T-cell activation. Additional membrane receptors of the CD28 and B7 families are also involved in immune checkpoints that positively or negatively regulate leukocyte activation, in particular T lymphocytes. BTLA is an inhibitory receptor that belongs to a third receptor family. Fish orthologs exist only for some of these genes, and the potential interactions between the corresponding ligands remain mostly unclear. In this work, we focused on the channel catfish (Ictalurus punctatus), a long-standing model for fish immunology, to analyze these co-stimulatory and co-inhibitory receptors. We identified one copy of cd28, ctla4, cd80/86, b7h1/dc, b7h3, b7h4, b7h5, two btla, and four b7h7 genes. Catfish CD28 contains the highly conserved mammalian cytoplasmic motif for PI3K and GRB2 recruitment, however this motif is absent in cyprinids. Fish CTLA4 share a C-terminal putative GRB2-binding site but lacks the mammalian PI3K/GRB2-binding motif. While critical V-domain residues for human CD80 or CD86 binding to CD28/CTLA4 show low conservation in fish CD80/86, C-domain residues are highly conserved, underscoring their significance. Catfish B7H1/DC had a long intracytoplasmic domain with a P-loop-NTPase domain that is absent in mammalian sequences, while the lack of NLS motif in fish B7H4 suggests this protein may not regulate cell growth when expressed intracellularly. Finally, there is a notable expansion of fish B7H7s, which likely play diverse roles in leukocyte regulation. Overall, our work contributes to a better understanding of fish leukocyte co-stimulatory and co-inhibitory receptors.

Indexed as

CD28 AntigensIctaluridaeAnimalsAntigens, CDB7-1 AntigenCell Adhesion MoleculesCTLA-4 AntigenHumansLigandsMammalsPhosphatidylinositol 3-KinasesAntigens, CDB7-1 AntigenCD28 AntigensCell Adhesion MoleculesCTLA-4 AntigenLigandsPhosphatidylinositol 3-KinasesB7B7-HBTLACD28Channel catfishCTLA4

Identifiers

PMID38197898
OpenAlexW4390698645

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.