Evidence map›Paper›PMID 38194078›Full record

ArticleBotanical studies2024

An optimum study on the laser scanning confocal microscopy techniques for BiFC assay using plant protoplast.

Jinhong Yuan, Daiyu Li, Yi Liang, Yao Meng, Li Li, Lin Yang, Mingyue Pei, Liuchun Feng, Junhua Li

Abstract read
In one paragraph

Article in Botanical studies, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Isolation and Transfection of Nicotiana benthamiana Mesophyll Protoplasts.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jinhong YuanEngineering Research Center of Crop Genetic Improvement and Germplasm Innovation in Henan Province, College of Life Sciences, Henan Normal University, Xinxiang, 453007, China.
Daiyu LiEngineering Research Center of Crop Genetic Improvement and Germplasm Innovation in Henan Province, College of Life Sciences, Henan Normal University, Xinxiang, 453007, China.
Yi LiangEngineering Research Center of Crop Genetic Improvement and Germplasm Innovation in Henan Province, College of Life Sciences, Henan Normal University, Xinxiang, 453007, China.
Yao MengEngineering Research Center of Crop Genetic Improvement and Germplasm Innovation in Henan Province, College of Life Sciences, Henan Normal University, Xinxiang, 453007, China.
Li LiEngineering Research Center of Crop Genetic Improvement and Germplasm Innovation in Henan Province, College of Life Sciences, Henan Normal University, Xinxiang, 453007, China.
Lin YangEngineering Research Center of Crop Genetic Improvement and Germplasm Innovation in Henan Province, College of Life Sciences, Henan Normal University, Xinxiang, 453007, China.
Mingyue PeiEngineering Research Center of Crop Genetic Improvement and Germplasm Innovation in Henan Province, College of Life Sciences, Henan Normal University, Xinxiang, 453007, China.
Liuchun FengEngineering Research Center of Crop Genetic Improvement and Germplasm Innovation in Henan Province, College of Life Sciences, Henan Normal University, Xinxiang, 453007, China.
Junhua LiEngineering Research Center of Crop Genetic Improvement and Germplasm Innovation in Henan Province, College of Life Sciences, Henan Normal University, Xinxiang, 453007, China. lijh@htu.cn.ORCID http://orcid.org/0000-0002-9360-1002

Funding

"Chunhui Program" Collaborative Scientific Research Project of the Ministry of Education of China 202200157National Natural Science Foundation of China 31670317National Natural Science Foundation of China 31970380National Natural Science Foundation of China U1504319
6 · The paper itself

Abstract

backgroundThe bimolecular fluorescence complementation (BiFC) assay is commonly used for investigating protein-protein interactions. While several BiFC detection systems have been developed, there is a limited amount of research focused on using laser scanning confocal microscope (LSCM) techniques to observe protoplasts. Protoplasts are more susceptible to damage and instability compared to their original cell state due to the preparation treatments they undergo, which makes it challenging for researchers to manipulate them during observation under LSCMs. Therefore, it is crucial to utilize microscope techniques properly and efficiently in BiFC assays.

resultsWhen the target fluorescence is weak, the autofluorescence of chloroplast particles in protoplasts can interfere with the detection of BiFC signals localized in the nuclear region. Spectrum analysis revealed that chloroplast autofluorescence can be excited by lasers of various types, with the highest fluorescence signal observed at around 660 nm. Furthermore, our investigation into the impact of different pipette tips on the integrity of protoplast samples indicated that the utilization of cut tips with larger openings can mitigate cell breakage. We presented a workflow of LSCM techniques for investigating protoplast BiFC and discussed the microscopic manipulation involved in sample preparation and image capturing.

conclusionWhen the BiFC signals are weak, they may be affected by chloroplast autofluorescence. However, when used properly, the autofluorescence of chloroplasts can serve as an excellent internal marker for effectively distinguishing other signals. In combination with other findings, this study can provide valuable reference for researchers conducting BiFC assays and related studies.

Indexed as

BiFCConfocal microscopyPreparation and observationProtoplast

Identifiers

PMID38194078
PMCPMC10776556

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.