Evidence map›Paper›PMID 38191931›Full record

ArticleNature methods2024

Mapping enzyme activity in living systems by real-time mid-infrared photothermal imaging of nitrile chameleons.

Hongjian He, Jiaze Yin, Mingsheng Li, Chinmayee Vallabh Prabhu Dessai, Meihui Yi, Xinyan Teng, Meng Zhang, Yueming Li, Zhiyi Du, Bing Xu and 1 more

Open access · greenAbstract read
In one paragraph

Article in Nature methods, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
6.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
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  5. Bond-Selective Imaging at the Frontier of Biomedicine.Chemical & biomedical imaging · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Hongjian He *Department of Electrical and Computer Engineering, Boston University, Boston, MA, USA.
Jiaze Yin *Department of Electrical and Computer Engineering, Boston University, Boston, MA, USA.
Mingsheng LiDepartment of Electrical and Computer Engineering, Boston University, Boston, MA, USA.
Chinmayee Vallabh Prabhu DessaiPhotonics Center, Boston University, Boston, MA, USA.ORCID http://orcid.org/0000-0001-9568-7770
Meihui YiDepartment of Chemistry, Brandeis University, Waltham, MA, USA.
Xinyan TengPhotonics Center, Boston University, Boston, MA, USA.ORCID http://orcid.org/0000-0003-4615-7524
Meng ZhangPhotonics Center, Boston University, Boston, MA, USA.
Yueming LiPhotonics Center, Boston University, Boston, MA, USA.ORCID http://orcid.org/0000-0002-0618-0722
Zhiyi DuPhotonics Center, Boston University, Boston, MA, USA.
Bing XuDepartment of Chemistry, Brandeis University, Waltham, MA, USA.ORCID http://orcid.org/0000-0002-4639-387X
Ji-Xin ChengDepartment of Electrical and Computer Engineering, Boston University, Boston, MA, USA. jxcheng@bu.edu.ORCID http://orcid.org/0000-0002-5607-6683
Boston University · USBrandeis University · US

Funding

Subcellular Enzyme-instructed self-assembly for molecular anticancer nanomedicinesR01CA142746 · NCI · BRANDEIS UNIVERSITY · PI Bing Xu · 2010 to 2026
$6.4M
Vibrational Spectroscopic Imaging to Unveil Hidden Signatures in Living SystemsR35GM136223 · NIGMS · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI CHENG, JI-XIN · 2020 to 2025
$5.7M
Mapping Cancer Metabolism by Mid-infrared Photothermal MicroscopyR33CA261726 · NCI · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI CHENG, JI-XIN · 2021 to 2023
$1.2M
NCI NIH HHS R01 CA142746NCI NIH HHS R33 CA261726NIGMS NIH HHS R35 GM136223U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R01CA142746U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R33CA261726U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R35GM136223
6 · The paper itself

Abstract

Simultaneous spatial mapping of the activity of multiple enzymes in a living system can elucidate their functions in health and disease. However, methods based on monitoring fluorescent substrates are limited. Here, we report the development of nitrile (C≡N)-tagged enzyme activity reporters, named nitrile chameleons, for the peak shift between substrate and product. To image these reporters in real time, we developed a laser-scanning mid-infrared photothermal imaging system capable of imaging the enzymatic substrates and products at a resolution of 300 nm. We show that when combined, these tools can map the activity distribution of different enzymes and measure their relative catalytic efficiency in living systems such as cancer cells, Caenorhabditis elegans, and brain tissues, and can be used to directly visualize caspase-phosphatase interactions during apoptosis. Our method is generally applicable to a broad category of enzymes and will enable new analyses of enzymes in their native context.

Indexed as

Diagnostic ImagingNitrilesColoring AgentsColoring AgentsNitriles

Identifiers

PMID38191931
PMCPMC11165695
OpenAlexW4390671019

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.