Evidence map›Paper›PMID 38191907›Full record

ArticleScientific reports2024

NTRK2 expression in gastrointestinal stromal tumors with a special emphasis on the clinicopathological and prognostic impacts.

Keita Sasa, Raku Son, Akiko Oguchi, Karin Ashizawa, Nobuhiko Hasegawa, Daisuke Kubota, Yoshiyuki Suehara, Tatsuya Takagi, Taketo Okubo, Keisuke Akaike and 11 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 7 citations in OpenAlex.

  1. A Systematic Review with a Demonstrative Case of KIT and DOG-1 Expressing Gastrointestinal Stromal Tumors Harboring ETV6-NTRK3 Fusions.Clinical cancer research : an official journal of the American Association for Cancer Research · 2025
    Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. International journal of molecular sciences · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 4 institutions in 2 countries.

Keita SasaDepartment of Human Pathology, Juntendo University School of Medicine, Tokyo, Japan.
Raku SonRIKEN Center for Integrative Medical Sciences, Yokohama, Japan.
Akiko OguchiRIKEN Center for Integrative Medical Sciences, Yokohama, Japan.
Karin AshizawaDepartment of Human Pathology, Juntendo University School of Medicine, Tokyo, Japan.
Nobuhiko HasegawaDepartment of Medicine for Orthopaedics and Motor Organ, Juntendo University School of Medicine, Tokyo, Japan.
Daisuke KubotaDepartment of Medicine for Orthopaedics and Motor Organ, Juntendo University School of Medicine, Tokyo, Japan.
Yoshiyuki SueharaDepartment of Medicine for Orthopaedics and Motor Organ, Juntendo University School of Medicine, Tokyo, Japan.
Tatsuya TakagiDepartment of Medicine for Orthopaedics and Motor Organ, Juntendo University School of Medicine, Tokyo, Japan.
Taketo OkuboDepartment of Medicine for Orthopaedics and Motor Organ, Juntendo University School of Medicine, Tokyo, Japan.
Keisuke AkaikeDepartment of Medicine for Orthopaedics and Motor Organ, Juntendo University School of Medicine, Tokyo, Japan.
Kiichi SugimotoDepartment of Coloproctological Surgery, Graduate School of Medicine, Juntendo University, Tokyo, 113-8421, Japan.
Makoto TakahashiDepartment of Coloproctological Surgery, Graduate School of Medicine, Juntendo University, Tokyo, 113-8421, Japan.
Kazuhiro SakamotoDepartment of Coloproctological Surgery, Graduate School of Medicine, Juntendo University, Tokyo, 113-8421, Japan.
Takashi HashimotoDepartment of Upper Gastroenterological Surgery, Juntendo University Hospital, Bunkyo-ku, Tokyo, 113-8431, Japan.
Shinji MineDepartment of Upper Gastroenterological Surgery, Juntendo University Hospital, Bunkyo-ku, Tokyo, 113-8431, Japan.
Tetsu FukunagaDepartment of Upper Gastroenterological Surgery, Juntendo University Hospital, Bunkyo-ku, Tokyo, 113-8431, Japan.
Muneaki IshijimaDepartment of Medicine for Orthopaedics and Motor Organ, Juntendo University School of Medicine, Tokyo, Japan.
Takuo HayashiDepartment of Human Pathology, Juntendo University School of Medicine, Tokyo, Japan.
Takashi YaoDepartment of Human Pathology, Juntendo University School of Medicine, Tokyo, Japan.
Yasuhiro MurakawaRIKEN Center for Integrative Medical Sciences, Yokohama, Japan.
Tsuyoshi SaitoDepartment of Human Pathology, Juntendo University School of Medicine, Tokyo, Japan. tysaitou@juntendo.ac.jp.
Juntendo University · JPJuntendo University Hospital · JPRIKEN Center for Integrative Medical Sciences · JPKyoto University · JP

Funding

Japan Society for the Promotion of Science 18K15329Japan Society for the Promotion of Science 19H03789Japan Society for the Promotion of Science 19K16753Japan Society for the Promotion of Science 20K07415
6 · The paper itself

Abstract

Gastrointestinal stromal tumors (GISTs) are typically characterized by activating mutations of the KIT proto-oncogene receptor tyrosine kinase (KIT) or platelet-derived growth factor receptor alpha (PDGFRA). Recently, the neurotrophic tyrosine receptor kinase (NTRK) fusion was reported in a small subset of wild-type GIST. We examined trk IHC and NTRK gene expressions in GIST. Pan-trk immunohistochemistry (IHC) was positive in 25 (all 16 duodenal and 9 out of 16 small intestinal GISTs) of 139 cases, and all pan-trk positive cases showed diffuse and strong expression of c-kit. Interestingly, all of these cases showed only trkB but not trkA/trkC expression. Cap analysis of gene expression (CAGE) analysis identified increased number of genes whose promoters were activated in pan-trk/trkB positive GISTs. Imbalanced expression of NTRK2, which suggests the presence of NTRK2 fusion, was not observed in any of trkB positive GISTs, despite higher mRNA expression. TrkB expression was found in duodenal GISTs and more than half of small intestinal GISTs, and this subset of cases showed poor prognosis. However, there was not clear difference in clinical outcomes according to the trkB expression status in small intestinal GISTs. These findings may provide a possible hypothesis for trkB overexpression contributing to the tumorigenesis and aggressive clinical outcome in GISTs of duodenal origin.

Indexed as

Gastrointestinal Stromal TumorsHumansPrognosisProto-Oncogene Proteins c-kitProto-OncogenesReceptor Protein-Tyrosine KinasesProto-Oncogene Proteins c-kitReceptor Protein-Tyrosine Kinases

Identifiers

PMID38191907
PMCPMC10774370
OpenAlexW4390670187

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.