Evidence map›Paper›PMID 38189956›Full record

ArticleApplied microbiology and biotechnology2024

Hydrolysis of ionic liquid-treated substrate with an Iocasia fonsfrigidae strain SP3-1 endoglucanase.

Sobroney Heng, Sawannee Sutheeworapong, Chinnapong Wangnai, Verawat Champreda, Akihiko Kosugi, Khanok Ratanakhanokchai, Chakrit Tachaapaikoon, Ruben Michael Ceballos

Abstract read
In one paragraph

Article in Applied microbiology and biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Sobroney HengSchool of Bioresources and Technology, King Mongkut's University of Technology Thonburi, Bangkok, 10150, Thailand.
Sawannee SutheeworapongSystems Biology and Bioinformatics Laboratory, Pilot Plant Development and Training Institute, King Mongkut's University of Technology Thonburi, Bangkok, 10150, Thailand.
Chinnapong WangnaiPilot Plant Development and Training Institute, King Mongkut's University of Technology Thonburi, Bangkok, Thailand.
Verawat ChampredaNational Center for Genetic Engineering and Biotechnology, 113 Thailand Science Park, Paholyothin Road Klong Luang, Pathumthani, 12120, Thailand.
Akihiko KosugiBiological Resources and Post-Harvest Division, Japan International Research Center for Agricultural Sciences, Ibaraki, Japan.
Khanok RatanakhanokchaiSchool of Bioresources and Technology, King Mongkut's University of Technology Thonburi, Bangkok, 10150, Thailand.
Chakrit TachaapaikoonSchool of Bioresources and Technology, King Mongkut's University of Technology Thonburi, Bangkok, 10150, Thailand. chakrit.tac@kmutt.ac.th.
Ruben Michael CeballosDepartment of Molecular and Cell Biology, University of California, Merced, CA, 95343, USA. rceballos@ucmerced.edu.ORCID http://orcid.org/0000-0002-8869-2800

Funding

National Science Foundation 1818346National Science Foundation 1856091National Science Foundation 2119968
6 · The paper itself

Abstract

Recently, we reported the discovery of a novel endoglucanase of the glycoside hydrolase family 12 (GH12), designated IfCelS12A, from the haloalkaliphilic anaerobic bacterium Iocasia fonsfrigidae strain SP3-1, which was isolated from a hypersaline pond in the Samut Sakhon province of Thailand (ca. 2017). IfCelS12A exhibits high substrate specificity on carboxymethyl cellulose and amorphous cellulose but low substrate specificity on b-1,3;1,4-glucan. Unlike some endoglucanases of the GH12 family, IfCelS12A does not exhibit hydrolytic activity on crystalline cellulose (i.e., Avicel™). High-Pressure Liquid Chromatography (HPLC) and Thin Layer Chromatography (TLC) analyses of products resulting from IfCelS12-mediated hydrolysis indicate mode of action for this enzyme. Notably, IfCelS12A preferentially hydrolyzes cellotetraoses, cellopentaoses, and cellohexaoses with negligible activity on cellobiose or cellotriose. Kinetic analysis with cellopentaose and barely b-D-glucan as cellulosic substrates were conducted. On cellopentaose, IfCelS12A demonstrates a 16-fold increase in activity (K

Indexed as

CellulaseIonic LiquidsBacteria, AnaerobicBase CompositionCelluloseGlucansHydrolysisKineticsPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNASodium ChlorideThailandCellulaseCelluloseGlucansIonic LiquidsRNA, Ribosomal, 16SSodium ChlorideEndoglucanaseEnzyme platformGlycoside hydrolase family 12Iocasia fonsfrigidae strain SP3-1Ionic liquidsSalt tolerance

Identifiers

PMID38189956
PMCPMC10774164

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.