Evidence map›Paper›PMID 38189150›Full record

ArticleCirculation2024

A Genomic Link From Heart Failure to Atrial Fibrillation Risk: FOG2 Modulates a TBX5/GATA4-Dependent Atrial Gene Regulatory Network.

Michael T Broman, Rangarajan D Nadadur, Carlos Perez-Cervantes, Ozanna Burnicka-Turek, Sonja Lazarevic, Anna Gams, Brigitte Laforest, Jeffrey D Steimle, Sabrina Iddir, Zhezhen Wang and 16 more

Open access · greenAbstract read
In one paragraph

Article in Circulation, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

26 authors at 11 institutions in 4 countries.

Michael T Broman *Department of Medicine, Section of Cardiology (M.T.B., B.L., S.R.M.), University of Chicago, IL.
Rangarajan D Nadadur *Departments of Pediatrics (R.D.N., C.P.-C., O.B.-T., S.L., J.D.S., S.I., Z.W., L.S., M.G., K.M.S., Z.K., J.W.M.T., X.H.Y., I.P.M.), University of Chicago, IL.
Carlos Perez-Cervantes *Departments of Pediatrics (R.D.N., C.P.-C., O.B.-T., S.L., J.D.S., S.I., Z.W., L.S., M.G., K.M.S., Z.K., J.W.M.T., X.H.Y., I.P.M.), University of Chicago, IL.ORCID 0000-0003-1352-7322
Ozanna Burnicka-TurekDepartments of Pediatrics (R.D.N., C.P.-C., O.B.-T., S.L., J.D.S., S.I., Z.W., L.S., M.G., K.M.S., Z.K., J.W.M.T., X.H.Y., I.P.M.), University of Chicago, IL.ORCID 0000-0002-3770-4314
Sonja LazarevicDepartments of Pediatrics (R.D.N., C.P.-C., O.B.-T., S.L., J.D.S., S.I., Z.W., L.S., M.G., K.M.S., Z.K., J.W.M.T., X.H.Y., I.P.M.), University of Chicago, IL.
Anna GamsDepartment of Biomedical Engineering, George Washington University (A.G., I.R.E.), Washington, DC.ORCID 0000-0002-3052-8469
Brigitte LaforestDepartment of Medicine, Section of Cardiology (M.T.B., B.L., S.R.M.), University of Chicago, IL.
Jeffrey D SteimlePathology (R.D.N., C.P.-C., O.B.-T., S.L., J.D.S., S.I., Z.W., L.S., M.G., K.M.S., Z.K., J.W.M.T., X.H.Y., C.R.W., I.P.M.), University of Chicago, IL.
Sabrina IddirPathology (R.D.N., C.P.-C., O.B.-T., S.L., J.D.S., S.I., Z.W., L.S., M.G., K.M.S., Z.K., J.W.M.T., X.H.Y., C.R.W., I.P.M.), University of Chicago, IL.
Zhezhen WangDepartments of Pediatrics (R.D.N., C.P.-C., O.B.-T., S.L., J.D.S., S.I., Z.W., L.S., M.G., K.M.S., Z.K., J.W.M.T., X.H.Y., I.P.M.), University of Chicago, IL.
Linsin SmithDepartments of Pediatrics (R.D.N., C.P.-C., O.B.-T., S.L., J.D.S., S.I., Z.W., L.S., M.G., K.M.S., Z.K., J.W.M.T., X.H.Y., I.P.M.), University of Chicago, IL.
Stefan R MazurekDepartment of Medicine, Section of Cardiology (M.T.B., B.L., S.R.M.), University of Chicago, IL.
Harold E OliveyDepartment of Biology, Indiana University Northwest, Gary (H.E.O.).
Pingzhu ZhouSchool of Medicine, Shanghai University, China (P.Z.).ORCID 0000-0002-1917-257X
Margaret GadekDepartments of Pediatrics (R.D.N., C.P.-C., O.B.-T., S.L., J.D.S., S.I., Z.W., L.S., M.G., K.M.S., Z.K., J.W.M.T., X.H.Y., I.P.M.), University of Chicago, IL.ORCID 0000-0001-5453-6909
Kaitlyn M ShenDepartments of Pediatrics (R.D.N., C.P.-C., O.B.-T., S.L., J.D.S., S.I., Z.W., L.S., M.G., K.M.S., Z.K., J.W.M.T., X.H.Y., I.P.M.), University of Chicago, IL.ORCID 0000-0002-9085-6384
Zoheb KhanDepartments of Pediatrics (R.D.N., C.P.-C., O.B.-T., S.L., J.D.S., S.I., Z.W., L.S., M.G., K.M.S., Z.K., J.W.M.T., X.H.Y., I.P.M.), University of Chicago, IL.
Joshua W M TheisenDepartments of Pediatrics (R.D.N., C.P.-C., O.B.-T., S.L., J.D.S., S.I., Z.W., L.S., M.G., K.M.S., Z.K., J.W.M.T., X.H.Y., I.P.M.), University of Chicago, IL.ORCID 0000-0002-6267-5391
Xinan H YangDepartments of Pediatrics (R.D.N., C.P.-C., O.B.-T., S.L., J.D.S., S.I., Z.W., L.S., M.G., K.M.S., Z.K., J.W.M.T., X.H.Y., I.P.M.), University of Chicago, IL.ORCID 0000-0001-8061-8692
Kohta IkegamiDivision of Molecular and Cardiovascular Biology, Cincinnati Children's Hospital Medical Center, OH (K.I.).ORCID 0000-0002-0405-1193
Igor R EfimovDepartment of Biomedical Engineering, George Washington University (A.G., I.R.E.), Washington, DC.ORCID 0000-0002-1483-5039
William T PuHarvard Stem Cell Institute, Harvard University, Cambridge, MA (W.T.P.).ORCID 0000-0002-4551-8079
Christopher R WeberPathology (R.D.N., C.P.-C., O.B.-T., S.L., J.D.S., S.I., Z.W., L.S., M.G., K.M.S., Z.K., J.W.M.T., X.H.Y., C.R.W., I.P.M.), University of Chicago, IL.ORCID 0000-0002-2117-3184
Elizabeth M McNallyCenter for Genetic Medicine, Northwestern University, Chicago, IL (E.M.M.).ORCID 0000-0002-1221-719X
Eric C SvenssonBoston Pharmaceuticals, Cambridge, MA (E.C.S.).
Ivan P MoskowitzDepartments of Pediatrics (R.D.N., C.P.-C., O.B.-T., S.L., J.D.S., S.I., Z.W., L.S., M.G., K.M.S., Z.K., J.W.M.T., X.H.Y., I.P.M.), University of Chicago, IL.ORCID 0000-0003-0014-4963
Maine Farmland Trust · USMahindra and Mahindra Limited (India) · INGeorge Washington University · USUniversity of Chicago · USAVEO Oncology (United States) · USBoston Children's Hospital · USCincinnati Children's Hospital Medical Center · USIndiana University Northwest · USNorthwestern University · USShanghai University · CNTwitter (United States) · US

Funding

Molecular And Cellular Biology Training ProgramT32GM007183 · NIGMS · UNIVERSITY OF CHICAGO · PI GLICK, BENJAMIN S, RICE, PHOEBE A · 1985 to 2021
$23.9M
MULTIDISCIPLINARY CARDIAC SCIENCEST32HL007381 · NHLBI · UNIVERSITY OF CHICAGO · PI JEANNE M DECARA, Yoav Gilad · 1985 to 2026
$12.5M
Trisomy 21 and its impact on hedgehog-dependent gene regulation and differentiation timingR01HD111938 · NICHD · UNIVERSITY OF CHICAGO · PI Ivan Paul Moskowitz · 2023 to 2026
$6.7M
Transcriptional regulation of chamber selective gene expressionR01HL156503 · NHLBI · BOSTON CHILDREN'S HOSPITAL · PI William Tswenching Pu · 2021 to 2026
$4.0M
Discovery and interrogation of genetic regulatory variation impacting Atrial Fibrillation riskR01HL163523 · NHLBI · UNIVERSITY OF CHICAGO · PI HE, XIN, MOSKOWITZ, IVAN PAUL · 2022 to 2025
$3.1M
The molecular basis of cardiac differentiation controlR01HL147571 · NHLBI · UNIVERSITY OF CHICAGO · PI MOSKOWITZ, IVAN PAUL · 2019 to 2023
$2.8M
Gene Regulatory Non-Coding RNAs in the Human HeartR01HL148719 · NHLBI · UNIVERSITY OF CHICAGO · PI MOSKOWITZ, IVAN PAUL, RUTHENBURG, ALEXANDER JACKSON · 2019 to 2022
$2.3M
Left-right asymmetry and PITX2 in atrial fibrillationK99HL169742 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI STEIMLE, JEFFREY DAVID · 2023 to 2024
$214k
Defining the TBX5-Dependent Gene Regulatory Networks of Atrial FibrillationF30HL131298 · NHLBI · UNIVERSITY OF CHICAGO · PI NADADUR, RANGARAJAN · 2016 to 2017
$98k
NHLBI NIH HHS F30 HL131298NHLBI NIH HHS K99 HL169742NHLBI NIH HHS R01 HL147571NHLBI NIH HHS R01 HL148719NHLBI NIH HHS R01 HL156503NHLBI NIH HHS R01 HL163523NHLBI NIH HHS T32 HL007381NICHD NIH HHS R01 HD111938NIGMS NIH HHS T32 GM007183
6 · The paper itself

Abstract

backgroundThe relationship between heart failure (HF) and atrial fibrillation (AF) is clear, with up to half of patients with HF progressing to AF. The pathophysiological basis of AF in the context of HF is presumed to result from atrial remodeling. Upregulation of the transcription factor FOG2 (friend of GATA2; encoded by

methodsFOG2 expression was assessed in human atria. The effect of adult-specific FOG2 overexpression in the mouse heart was evaluated by whole animal electrophysiology, in vivo organ electrophysiology, cellular electrophysiology, calcium flux, mouse genetic interactions, gene expression, and genomic function, including a novel approach for defining functional transcription factor interactions based on overlapping effects on enhancer noncoding transcription.

resultsFOG2 is significantly upregulated in the human atria during HF. Adult cardiomyocyte-specific FOG2 overexpression in mice caused primary spontaneous AF before the development of HF or atrial remodeling. FOG2 overexpression generated arrhythmia substrate and trigger in cardiomyocytes, including calcium cycling defects. We found that FOG2 repressed atrial gene expression promoted by TBX5. FOG2 bound a subset of GATA4 and TBX5 co-bound genomic locations, defining a shared atrial gene regulatory network. FOG2 repressed TBX5-dependent transcription from a subset of co-bound enhancers, including a conserved enhancer at the

conclusionsTranscriptional changes in the atria observed in human HF directly antagonize the atrial rhythm gene regulatory network, providing a genomic link between HF and AF risk independent of atrial remodeling.

Indexed as

Atrial FibrillationAtrial RemodelingHeart FailureAnimalsCalciumGATA4 Transcription FactorGene Regulatory NetworksGenomicsHeart AtriaHumansMiceTranscription FactorsCalciumGATA4 protein, humanGATA4 Transcription FactorTranscription Factorsatrial fibrillationcalcium signalinggene regulatory networksheart failureRNARNA, long noncodingRNA, untranslated

Identifiers

PMID38189150
PMCPMC11152454
OpenAlexW4390663772

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.