Evidence map›Paper›PMID 38188931›Full record

ArticleFrontiers in chemistry2023

Reaction pathways, proton transfer, and proton pumping in ba3 class cytochrome c oxidase: perspectives from DFT quantum chemistry and molecular dynamics.

Louis Noodleman, Andreas W Götz, Wen-Ge Han Du, Laura Hunsicker-Wang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in chemistry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Membrane-Bound Redox Enzyme CytochromeInternational journal of molecular sciences · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Louis NoodlemanDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA, United States.
Andreas W Götz *San Diego Supercomputer Center, University of California San Diego, La Jolla, CA, United States.
Wen-Ge Han Du *Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA, United States.
Laura Hunsicker-Wang *Department of Chemistry, Trinity University, San Antonio, TX, United States.
Scripps Research Institute · USTrinity University · USUniversity of California, San Diego · US

Funding

Quantum Chemistry of Proton Pumping by Cytochrome c OxidasesR01GM100934 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI NOODLEMAN, LOUIS · 2012 to 2020
$3.1M
NIGMS NIH HHS R01 GM100934
6 · The paper itself

Abstract

After drawing comparisons between the reaction pathways of cytochrome c oxidase (CcO, Complex 4) and the preceding complex cytochrome bc

Indexed as

bioenergeticscytochrome c oxidaseDFT calculationselectron transport chainMD simulationsproton pumpingproton transferreaction pathway

Identifiers

PMID38188931
PMCPMC10766771
OpenAlexW4390111248

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.