Evidence map›Paper›PMID 38188372›Full record

ArticleInfluenza and other respiratory viruses2024

In-field detection and characterization of B/Victoria lineage deletion variant viruses causing early influenza activity and an outbreak in Louisiana, 2019.

Bo Shu, Malania M Wilson, Matthew W Keller, Ha Tran, Theresa Sokol, Grace Lee, Benjamin L Rambo-Martin, Marie K Kirby, Norman Hassell, Danielle Haydel and 3 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Influenza and other respiratory viruses, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Bo ShuVirology, Surveillance and Diagnosis Branch, Influenza Division Centers for Disease Control and Prevention Atlanta Georgia USA.
Malania M WilsonVirology, Surveillance and Diagnosis Branch, Influenza Division Centers for Disease Control and Prevention Atlanta Georgia USA.
Matthew W KellerVirology, Surveillance and Diagnosis Branch, Influenza Division Centers for Disease Control and Prevention Atlanta Georgia USA.
Ha TranLouisiana Department of Health Office of Public Health Laboratory Baton Rouge Louisiana USA.
Theresa SokolLouisiana Department of Health Office of Public Health, Infectious Disease Epidemiology New Orleans Louisiana USA.
Grace LeeLouisiana Department of Health Office of Public Health, Infectious Disease Epidemiology New Orleans Louisiana USA.
Benjamin L Rambo-MartinVirology, Surveillance and Diagnosis Branch, Influenza Division Centers for Disease Control and Prevention Atlanta Georgia USA.
Marie K KirbyVirology, Surveillance and Diagnosis Branch, Influenza Division Centers for Disease Control and Prevention Atlanta Georgia USA.ORCID 0000-0003-0859-9604
Norman HassellVirology, Surveillance and Diagnosis Branch, Influenza Division Centers for Disease Control and Prevention Atlanta Georgia USA.
Danielle HaydelLouisiana Department of Health Office of Public Health Laboratory Baton Rouge Louisiana USA.
Julie HandLouisiana Department of Health Office of Public Health, Infectious Disease Epidemiology New Orleans Louisiana USA.
David E WentworthVirology, Surveillance and Diagnosis Branch, Influenza Division Centers for Disease Control and Prevention Atlanta Georgia USA.
John R BarnesVirology, Surveillance and Diagnosis Branch, Influenza Division Centers for Disease Control and Prevention Atlanta Georgia USA.
Centers for Disease Control and Prevention · USLouisiana State Department of Health and Hospitals · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: In 2019, the Louisiana Department of Health reported an early influenza B/Victoria (B/VIC) virus outbreak. Method: As it was an atypically large outbreak, we deployed to Louisiana to investigate it using genomics and a triplex real-time RT-PCR assay to detect three antigenically distinct B/VIC lineage variant viruses. Results: The investigation indicated that B/VIC V1A.3 subclade, containing a three amino acid deletion in the hemagglutinin and known to be antigenically distinct to the B/Colorado/06/2017 vaccine virus, was the most prevalent circulating virus within the specimens evaluated (86/88 in real-time RT-PCR). Conclusion: This work underscores the value of portable platforms for rapid, onsite pathogen characterization.

Indexed as

Influenza, HumanInfluenza VaccinesDisease OutbreaksFluorenesHumansLouisianaFluorenesInfluenza VaccinesL 644711amino acid deletionB/Victoria lineagein‐field detectioninfluenza outbreak

Identifiers

PMID38188372
PMCPMC10767671
OpenAlexW4390615194

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.