Evidence map›Paper›PMID 38188247›Full record

ArticleAccess microbiology2023

Impact of swab removal in the detection of SARS-CoV-2 weakly-positive specimens.

Azul Zorzoli, Susan Bennett-Slater, Alasdair MacLean, Gina McAllister, Rory Gunson, Kate Templeton

Open access · goldAbstract read
In one paragraph

Article in Access microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 76% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Azul ZorzoliDepartment of Clinical Microbiology, NHS Lothian, Edinburgh, UK.ORCID https://orcid.org/0000-0002-9685-2659
Susan Bennett-SlaterWest of Scotland Specialist Virology Centre, Glasgow Royal Infirmary, Glasgow, UK.
Alasdair MacLeanWest of Scotland Specialist Virology Centre, Glasgow Royal Infirmary, Glasgow, UK.
Gina McAllisterDepartment of Clinical Microbiology, NHS Lothian, Edinburgh, UK.
Rory GunsonWest of Scotland Specialist Virology Centre, Glasgow Royal Infirmary, Glasgow, UK.
Kate TempletonDepartment of Clinical Microbiology, NHS Lothian, Edinburgh, UK.
Glasgow Royal Infirmary · GBNHS Lothian · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Removing the swab after collection can speed up diagnosis and improve the quality of laboratory procedures. This study investigates the impact of swab removal on SARS-CoV-2 detection in clinical specimens with a focus on high Cycle threshold (Ct) samples (Cts≥32). The method assessed pairs of SARS-CoV-2 samples mimicking combined throat and nose swabs and tested them on two real-time-PCR platforms; the Applied Biosystems 7500 and the Abbott Alinity. Swab removal did not significantly affect detection rates of SARS-CoV-2 samples with Ct values<32, regardless of the PCR platform. However, reduced reproducibility was seen at the endpoint limit of detection of the platforms, which meant that fewer samples with Ct values≥32 were detected in the swab removal group.

Indexed as

cycle threshold (Ct)SARS-CoV-2 detectionswabbingviral load

Identifiers

PMID38188247
PMCPMC10765045
OpenAlexW4389648935

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.