Evidence map›Paper›PMID 38187557›Full record

ArticlebioRxiv : the preprint server for biology2023

PRDM3/16 Regulate Chromatin Accessibility Required for NKX2-1 Mediated Alveolar Epithelial Differentiation and Function.

Hua He, Sheila M Bell, Ashley Kuenzi Davis, Shuyang Zhao, Anusha Sridharan, Cheng-Lun Na, Minzhe Guo, Yan Xu, John Snowball, Daniel T Swarr and 2 more

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 4 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 3 countries.

Hua HeKey Laboratory of Birth Defects and Related Disease of Women and Children of MOE, West China Second University Hospital Sichuan University, Chengdu, Sichuan, 610041, China.
Sheila M BellPerinatal Institute, Division of Neonatology and Pulmonary Biology, Cincinnati Children's Hospital Medical Center.
Ashley Kuenzi DavisPerinatal Institute, Division of Neonatology and Pulmonary Biology, Cincinnati Children's Hospital Medical Center.
Shuyang ZhaoPerinatal Institute, Division of Neonatology and Pulmonary Biology, Cincinnati Children's Hospital Medical Center.
Anusha SridharanPerinatal Institute, Division of Neonatology and Pulmonary Biology, Cincinnati Children's Hospital Medical Center.
Cheng-Lun NaPerinatal Institute, Division of Neonatology and Pulmonary Biology, Cincinnati Children's Hospital Medical Center.
Minzhe GuoPerinatal Institute, Division of Neonatology and Pulmonary Biology, Cincinnati Children's Hospital Medical Center.
Yan XuPerinatal Institute, Division of Neonatology and Pulmonary Biology, Cincinnati Children's Hospital Medical Center.ORCID 0000-0003-2025-027X
John SnowballPerinatal Institute, Division of Neonatology and Pulmonary Biology, Cincinnati Children's Hospital Medical Center.
Daniel T SwarrPerinatal Institute, Division of Neonatology and Pulmonary Biology, Cincinnati Children's Hospital Medical Center.
William J ZachariasPerinatal Institute, Division of Neonatology and Pulmonary Biology, Cincinnati Children's Hospital Medical Center.ORCID 0000-0002-2643-0610
Jeffrey A WhitsettPerinatal Institute, Division of Neonatology and Pulmonary Biology, Cincinnati Children's Hospital Medical Center.ORCID 0000-0003-1668-5174
Cincinnati Children's Hospital Medical Center · USSichuan University · CN

Funding

Prdm3/16 Regulate Chromatin Accessibility to Determine Alveolar MaturationR01HL164414 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI WHITSETT, JEFFREY A · 2022 to 2025
$2.8M
NHLBI NIH HHS R01 HL164414
6 · The paper itself

Abstract

Differential chromatin accessibility accompanies and mediates transcriptional control of diverse cell fates and their differentiation during embryogenesis. While the critical role of NKX2-1 and its transcriptional targets in lung morphogenesis and pulmonary epithelial cell differentiation is increasingly known, mechanisms by which chromatin accessibility alters the epigenetic landscape and how NKX2-1 interacts with other co-activators required for alveolar epithelial cell differentiation and function are not well understood. Here, we demonstrate that the paired domain zinc finger transcriptional regulators PRDM3 and PRDM16 regulate chromatin accessibility to mediate cell differentiation decisions during lung morphogenesis. Combined deletion of

Indexed as

Alveolar Epithelial CellChromatin AccessibilityDifferentiationPRDMPulmonary Surfactant

Identifiers

PMID38187557
PMCPMC10769259
OpenAlexW4390053696

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.