Evidence map›Paper›PMID 38186977›Full record

ArticleAmerican journal of translational research2023

Inhibition of lncRNA RPPH1 activity decreases tumor proliferation and metastasis through down-regulation of inflammation-related oncogenes.

Yuan-Ho Lin, Chih-Wei Chen, Hung-Chi Cheng, Chun-Jhih Liu, Sheng-Ting Chung, Meng-Che Hsieh, Po-Lin Tseng, Wen-Hui Tsai, Tian-Shung Wu, Ming-Derg Lai and 4 more

Open access · greenAbstract read
In one paragraph

Article in American journal of translational research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Yuan-Ho LinInstitute of Basic Medical Sciences, College of Medicine, National Cheng Kung University Tainan 701, Taiwan.
Chih-Wei ChenInstitute of Clinical Medicine, College of Medicine, National Cheng Kung University Tainan 701, Taiwan.
Hung-Chi ChengInstitute of Basic Medical Sciences, College of Medicine, National Cheng Kung University Tainan 701, Taiwan.
Chun-Jhih LiuDepartment of Biochemistry and Molecular Biology, College of Medicine, National Cheng Kung University Tainan 701, Taiwan.
Sheng-Ting ChungDepartment of Biochemistry and Molecular Biology, College of Medicine, National Cheng Kung University Tainan 701, Taiwan.
Meng-Che HsiehDepartment of Biochemistry and Molecular Biology, College of Medicine, National Cheng Kung University Tainan 701, Taiwan.
Po-Lin TsengGraduate Institute of Clinical Medical Sciences, College of Medicine, Chang Gung University Taoyuan 302, Taiwan.
Wen-Hui TsaiInstitute of Clinical Medicine, College of Medicine, National Cheng Kung University Tainan 701, Taiwan.
Tian-Shung WuSchool of Pharmacy, College of Medicine, National Cheng Kung University Tainan 701, Taiwan.
Ming-Derg LaiInstitute of Basic Medical Sciences, College of Medicine, National Cheng Kung University Tainan 701, Taiwan.
Chia-Lung ShihClinical Research Center, Ditmanson Medical Foundation Chia-Yi Christian Hospital Chiayi 600, Taiwan.
Meng-Chi YenDepartment of Emergency Medicine, Kaohsiung Medical University Hospital, Kaohsiung Medical University Kaohsiung 807, Taiwan.
Wen-Kuei FangDepartment of Neurosurgery, Ditmanson Medical Foundation Chia-Yi Christian Hospital Chiayi 600, Taiwan.
Wen-Tsan ChangInstitute of Basic Medical Sciences, College of Medicine, National Cheng Kung University Tainan 701, Taiwan.
National Cheng Kung University · TWChia-Yi Christian Hospital · TWChi Mei Medical Center · TWChang Gung University · TWKaohsiung Medical University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveRibonuclease P RNA component H1 (RPPH1) is a long non-coding RNA (lncRNA) associated with cancer progression. Higher RPPH1 expression in breast and cervical cancer samples than that in normal tissues were observed through the lncRNASNP2 database; therefore, silencing RPPH1 expression might be a potential strategy for cancer treatments, even though RPPH1 is also an RNA subunit of ribonuclease P involved in processing transfer RNA (tRNA) precursors and the effect of RPPH1 knockdown is not yet fully understood.

methodsDifferentially expressed genes (DEGs) were identified through RNA sequencing in each shRNA-transfected RPPH1 knockdown MDA-MB-231, RPPH1 knockdown HeLa cell, and respective control cells, then the gene ontology enrichment analysis was performed by IPA and MetaCore database according to these DEGs, with further

resultsHundreds of down-regulated DEGs were identified in RPPH1 knockdown MDA-MB-231 and HeLa cells while bioinformatics analysis revealed that these genes were involved in pathways related to immune response and cancerogenesis. Compared to mock- and vector-transfected cells, the production of mature tRNAs, cell proliferation and migration capacity were inhibited in RPPH1-silenced HeLa and MDA-MB-231 cells. Additionally, RPPH1 knockdown promoted G1 cell cycle arrest mainly through the down-regulation of cyclin D1, although glycolytic pathways were only affected in RPPH1 knockdown HeLa cells but not MDA-MB-231 cells.

conclusionThis study demonstrated that knockdown RPPH1 affected tRNA production, cell proliferation and metabolism. Our findings might provide insight into the role of RPPH1 in tumor development.

Indexed as

Long noncoding RNAnext-generation sequencingribonuclease P RNA component H1transfer RNAtumor progression

Identifiers

PMID38186977
PMCPMC10767529
OpenAlexW4390689756

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.