Evidence map›Paper›PMID 38185943›Full record

ReviewJournal of experimental zoology. Part B, Molecular and developmental evolution2024

Exploring pathways toward open-hardware ecosystems to safeguard genetic resources for biomedical research communities using aquatic model species.

Yue Liu, Jack C Koch, Lucía Arregui, Allyssa Oune, Sarah Bodenstein, Maria T Gutierrez-Wing, Terrence R Tiersch

Open access · greenAbstract readReview
In one paragraph

Review in Journal of experimental zoology. Part B, Molecular and developmental evolution, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
5.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Manipulating Time by Cryopreservation: Designing an Environmental Future by Maintaining a Portal to the Past.The Journal of law, medicine & ethics : a journal of the American Society of Law, Medicine & Ethics · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Yue LiuAquatic Germplasm and Genetic Resources Center, School of Renewable Natural Resources, Louisiana State University Agricultural Center, Baton Rouge, Louisiana, USA.ORCID 0000-0003-3838-8277
Jack C KochAquatic Germplasm and Genetic Resources Center, School of Renewable Natural Resources, Louisiana State University Agricultural Center, Baton Rouge, Louisiana, USA.
Lucía ArreguiAquatic Germplasm and Genetic Resources Center, School of Renewable Natural Resources, Louisiana State University Agricultural Center, Baton Rouge, Louisiana, USA.
Allyssa OuneAquatic Germplasm and Genetic Resources Center, School of Renewable Natural Resources, Louisiana State University Agricultural Center, Baton Rouge, Louisiana, USA.
Sarah BodensteinAquatic Germplasm and Genetic Resources Center, School of Renewable Natural Resources, Louisiana State University Agricultural Center, Baton Rouge, Louisiana, USA.
Maria T Gutierrez-WingAquatic Germplasm and Genetic Resources Center, School of Renewable Natural Resources, Louisiana State University Agricultural Center, Baton Rouge, Louisiana, USA.
Terrence R TierschAquatic Germplasm and Genetic Resources Center, School of Renewable Natural Resources, Louisiana State University Agricultural Center, Baton Rouge, Louisiana, USA.
Louisiana State University Agricultural Center · US

Funding

Safeguarding Genetic Resources of Aquatic Biomedical Models - Research SupplementalR24OD028443 · OD · LOUISIANA STATE UNIV AGRICULTURAL CENTER · PI Jack Koch, Yue Liu · 2020 to 2026
$5.4M
Development of Germplasm Resources for Preservation of Aquatic ModelsR24OD010441 · OD · LOUISIANA STATE UNIV AGRICULTURAL CENTER · PI BLACKBURN, HARVEY D., MONROE, WILLIAM · 2012 to 2021
$4.3M
Establishing an Integrated Platform for Diploid Germplasm Conservation in Zebrafish (Danio rerio) – A&RR24OD034058 · OD · MICHIGAN STATE UNIVERSITY · PI JOSE B CIBELLI · 2023 to 2026
$3.3M
National Institute of Food and Agriculture, United States Department of Agriculture LAB94420National Institutes of Health, Office of Research Infrastructure Programs and R24-OD034058National Institutes of Health, Office of Research Infrastructure Programs R24-OD010441National Institutes of Health, Office of Research Infrastructure Programs R24-OD028443National Science Foundation 2229680NIH HHS R24 OD010441NIH HHS R24 OD028443NIH HHS R24 OD034058
6 · The paper itself

Abstract

Development of reliable germplasm repositories is critical for preservation of genetic resources of aquatic species, which are widely utilized to support biomedical innovation by providing a foundational source for naturally occurring variation and development of new variants through genetic manipulations. A significant barrier in repository development is the lack of cryopreservation capability and reproducibility across the research community, posing great risks of losing advances developed from billions of dollars of research investment. The emergence of open scientific hardware has fueled a new movement across biomedical research communities. With the increasing accessibility of consumer-level fabrication technologies, such as three-dimensional printers, open hardware devices can be custom designed, and design files distributed to community members for enhancing rigor, reproducibility, and standardization. The overall goal of this review is to explore pathways to create open-hardware ecosystems among the communities using aquatic model resources for biomedical research. To gain feedback and insights from community members, an interactive workshop focusing on open-hardware applications in germplasm repository development was held at the 2022 Aquatic Models for Human Disease Conference, Woods Hole, Massachusetts. This work integrates conceptual strategies with practical insights derived from workshop interactions using examples of germplasm repository development. These insights can be generalized for establishment of open-hardware ecosystems for a broad biomedical research community. The specific objectives were to: (1) introduce an open-hardware ecosystem concept to support biomedical research; (2) explore pathways toward open-hardware ecosystems through four major areas, and (3) identify opportunities and future directions.

Indexed as

Biomedical ResearchAnimalsAquatic OrganismsEcosystemModels, Animal3D printingaquatic modelsbiomedicinecryopreservationopen hardwareopen‐source ecosystems

Identifiers

PMID38185943
PMCPMC11099901
OpenAlexW4390666487

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.