Evidence map›Paper›PMID 38183477›Full record

ArticleApplied microbiology and biotechnology2024

Analysis of substrate specificity of cytochrome P450 monooxygenases involved in trichothecene toxin biosynthesis.

Rosa E Cardoza, Susan P McCormick, Natalia Martínez-Reyes, Joaquín Rodríguez-Fernández, Mark Busman, Robert H Proctor, Santiago Gutiérrez

Open access · goldAbstract read
In one paragraph

Article in Applied microbiology and biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Rosa E Cardoza *University Group for Research in Engineering and Sustainable Agriculture (GUIIAS), Area of Microbiology, University of León, Ponferrada, 24400, Spain.ORCID http://orcid.org/0000-0002-6589-0062
Susan P McCormick *Agricultural Research Service, Mycotoxin Prevention and Applied Microbiology Research Unit, USDA, National Center for Agricultural Utilization Research, 1815 N University St, Peoria, IL, 61604, USA.ORCID http://orcid.org/0000-0002-7824-6372
Natalia Martínez-ReyesUniversity Group for Research in Engineering and Sustainable Agriculture (GUIIAS), Area of Microbiology, University of León, Ponferrada, 24400, Spain.ORCID http://orcid.org/0000-0001-6560-417X
Joaquín Rodríguez-FernándezArea of Biochemistry and Molecular Biology, University of León, Ponferrada, 24400, Spain.ORCID http://orcid.org/0009-0008-6483-8204
Mark BusmanAgricultural Research Service, Mycotoxin Prevention and Applied Microbiology Research Unit, USDA, National Center for Agricultural Utilization Research, 1815 N University St, Peoria, IL, 61604, USA.ORCID http://orcid.org/0000-0001-9750-064X
Robert H ProctorAgricultural Research Service, Mycotoxin Prevention and Applied Microbiology Research Unit, USDA, National Center for Agricultural Utilization Research, 1815 N University St, Peoria, IL, 61604, USA. robert.proctor@ars.usda.gov.ORCID http://orcid.org/0000-0001-5400-1680
Santiago GutiérrezUniversity Group for Research in Engineering and Sustainable Agriculture (GUIIAS), Area of Microbiology, University of León, Ponferrada, 24400, Spain. s.gutierrez@unileon.es.ORCID http://orcid.org/0000-0001-6659-1390
Universidad de León · ESAgricultural Research Service · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Trichothecenes are a structurally diverse family of toxic secondary metabolites produced by certain species of multiple fungal genera. All trichothecene analogs share a core 12,13-epoxytrichothec-9-ene (EPT) structure but differ in presence, absence and types of substituents attached to various positions of EPT. Formation of some of the structural diversity begins early in the biosynthetic pathway such that some producing species have few trichothecene biosynthetic intermediates in common. Cytochrome P450 monooxygenases (P450s) play critical roles in formation of trichothecene structural diversity. Within some species, relaxed substrate specificities of P450s allow individual orthologs of the enzymes to modify multiple trichothecene biosynthetic intermediates. It is not clear, however, whether the relaxed specificity extends to biosynthetic intermediates that are not produced by the species in which the orthologs originate. To address this knowledge gap, we used a mutant complementation-heterologous expression analysis to assess whether orthologs of three trichothecene biosynthetic P450s (TRI11, TRI13 and TRI22) from Fusarium sporotrichioides, Trichoderma arundinaceum, and Paramyrothecium roridum can modify trichothecene biosynthetic intermediates that they do not encounter in the organism in which they originated. The results indicate that TRI13 and TRI22 could not modify the intermediates that they do not normally encounter, whereas TRI11 could modify an intermediate that it does not normally encounter. These findings indicate that substrate promiscuity varies among trichothecene biosynthetic P450s. One structural feature that likely impacts the ability of the P450s to use biosynthetic intermediates as substrates is the presence and absence of an oxygen atom attached to carbon atom 3 of EPT.

Indexed as

Cytochrome P-450 Enzyme SystemTrichothecenesSecondary MetabolismSubstrate SpecificityCytochrome P-450 Enzyme SystemtrichotheceneTrichothecenesCytochrome P450 monooxygenasesEvolutionary relationshipsGene deletionGene expressionSubstrate specificityTrichothecene biosynthesis

Identifiers

PMID38183477
PMCPMC10771604
OpenAlexW4390638486

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.