Evidence map›Paper›PMID 38181070›Full record

ArticleThe Journal of infectious diseases2024

Association of Oral Microbiome With Oral Human Papillomavirus Infection: A Population Study of the National Health and Nutrition Examination Survey, 2009-2012.

Xinyi Feng, Eshan U Patel, Jodie L White, Shilan Li, Xianming Zhu, Ni Zhao, Jianxin Shi, Daniel E Park, Cindy M Liu, Rupert Kaul and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Xinyi FengDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Eshan U PatelDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Jodie L WhiteDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Shilan LiDivision of Cancer Epidemiology and Genetics, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA.
Xianming ZhuDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Ni ZhaoDepartment of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, USA.ORCID 0000-0002-7762-3949
Jianxin ShiDivision of Cancer Epidemiology and Genetics, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA.
Daniel E ParkDepartment of Environmental and Occupational Health, Milken Institute School of Public Health, George Washington University, Washington, District of Columbia, USA.
Cindy M LiuDepartment of Environmental and Occupational Health, Milken Institute School of Public Health, George Washington University, Washington, District of Columbia, USA.
Rupert KaulDepartments of Medicine and Immunology, University of Toronto, Toronto, Ontario, Canada.
Jessica L ProdgerDepartment of Microbiology and Immunology, Schulich School of Medicine and Dentistry, Western University, London, Ontario, Canada.
Thomas C QuinnDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
M Kate GrabowskiDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Aaron A R TobianDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.ORCID 0000-0002-0517-3766
Johns Hopkins University · USMilken Institute · USNational Institutes of Health · USUniversity of Toronto · CAWestern University · CA

Funding

International Studies of the Acquired Immune Deficiency Syndrome (AIDS)ZIAAI000361 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI REDD, ANDREW · 2009 to 2025
$15.8M
Johns Hopkins HIV Epidemiology and Prevention Sciences Training ProgramT32AI102623 · NIAID · JOHNS HOPKINS UNIVERSITY · PI Shruti H Mehta · 2013 to 2026
$5.3M
T-cell depletion and maintenance of the HIV-1 latent reservoir in distinct tissue compartmentsR01DK131926 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI Melissa Laird Smith, AARON A TOBIAN · 2022 to 2026
$3.6M
How sex, host microenvironment, and immune responses shape acquisition of genital bacteria that increase HIV riskR01DK131936 · NIDDK · GEORGE WASHINGTON UNIVERSITY · PI Cindy Liu · 2022 to 2026
$3.0M
Colliding Epidemics During an Opioid Crisis: Impact of the COVID-19 Pandemic on Determinants of HIV and HCV Transmission Among People Who Inject DrugsF31DA054849 · NIDA · JOHNS HOPKINS UNIVERSITY · PI PATEL, ESHAN UDAY · 2021 to 2023
$140k
National Institute of Allergy and Infectious Diseases T32AI102623NHLBI NIH HHSNIAID NIH HHS T32 AI102623NIDA NIH HHS F31 DA054849NIDA NIH HHS F31DA054849NIDDK NIH HHS R01 DK131926NIDDK NIH HHS R01DK131926NIDDK NIH HHS R01 DK131936
6 · The paper itself

Abstract

backgroundOral human papillomavirus (HPV) infection and the oral microbiome are associated with oropharyngeal cancer. However, population-based data on the association of oral microbiome with oral HPV infection are limited.

methodA cross-sectional analysis of 5496 20-59-year-old participants in the 2009-2012 National Health and Nutrition Examination Survey was performed. Associations with oral HPV infection were assessed using multivariable logistic regression for oral microbiome α-diversity (within-sample diversity), and using principal coordinate analysis and permutational multivariate analysis of variance for β-diversity (between-sample heterogeneity).

resultsOverall, for α-diversity, a lower number of observed amplicon sequence variants (adjusted odds ratio [aOR] = 0.996; 95% confidence interval [CI] = .992-.999) and reduced Faith's phylogenetic diversity (aOR = 0.95; 95% CI = .90-.99) were associated with high-risk oral HPV infection. β-diversity showed differentiation of oral microbiome community by high-risk oral HPV infection as measured by Bray-Curtis dissimilarity (R2 = 0.054%; P = .029) and unweighted UniFrac distance (R2 = 0.046%; P = .045). There were differential associations when stratified by sex.

conclusionsBoth oral microbiome α-diversity and β-diversity were marginally associated with oral HPV infection. Longitudinal studies are needed to characterize the role of the microbiome in the natural history of oral HPV infection.

Indexed as

MicrobiotaMouthNutrition SurveysPapillomavirus InfectionsAdultCross-Sectional StudiesFemaleHumansMaleMiddle AgedPapillomaviridaeUnited StatesYoung AdultHPVhuman papillomavirusNational Health and Nutrition Examination Surveyoral microbiome

Identifiers

PMID38181070
PMCPMC11420769
OpenAlexW4390604311

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.